114 items (Parabacteroides goldsteinii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KKB47710.1	Hypothetical protein. (682 aa)
	KKB45155.1	Hypothetical protein. (105 aa)
	KKB45665.1	Hypothetical protein. (576 aa)
	KKB45664.1	Hypothetical protein. (373 aa)
	KKB45659.1	Hypothetical protein. (589 aa)
	KKB45966.1	Hypothetical protein. (233 aa)
	KKB45965.1	Hypothetical protein. (385 aa)
	KKB47318.1	Hypothetical protein. (270 aa)
	KKB47221.1	Hypothetical protein. (687 aa)
	KKB47709.1	Hypothetical protein. (255 aa)
	KKB47662.1	Hypothetical protein. (340 aa)
	KKB47661.1	Hypothetical protein. (250 aa)
	KKB47589.1	Hypothetical protein. (508 aa)
	KKB47938.1	Hypothetical protein. (216 aa)
	KKB48097.1	Hypothetical protein. (490 aa)
	KKB48096.1	Hypothetical protein. (226 aa)
	KKB48169.1	PAS domain S-box protein. (719 aa)
	KKB48874.1	Hypothetical protein. (372 aa)
	KKB48856.1	Hypothetical protein. (133 aa)
	KKB48839.1	Hypothetical protein. (345 aa)
	KKB48838.1	Hypothetical protein. (256 aa)
	KKB48836.1	Hypothetical protein. (362 aa)
	KKB48835.1	Hypothetical protein. (354 aa)
	KKB48834.1	Hypothetical protein. (240 aa)
	KKB48669.1	Hypothetical protein. (794 aa)
	KKB48639.1	PAS domain S-box protein. (502 aa)
	KKB48632.1	PAS domain S-box protein. (544 aa)
	KKB48587.1	Hypothetical protein. (174 aa)
	KKB48581.1	Hypothetical protein. (132 aa)
	KKB48561.1	Hypothetical protein. (225 aa)
	KKB48560.1	Hypothetical protein. (392 aa)
	KKB48547.1	PAS domain S-box protein. (552 aa)
	KKB49140.1	Hypothetical protein. (134 aa)
	KKB49124.1	Hypothetical protein. (253 aa)
	KKB49122.1	Hypothetical protein. (565 aa)
	KKB50345.1	Hypothetical protein. (312 aa)
	KKB50273.1	Hypothetical protein. (482 aa)
	KKB50272.1	Hypothetical protein. (227 aa)
	KKB53273.1	Hypothetical protein. (825 aa)
	KKB53829.1	Hypothetical protein. (228 aa)
	KKB53828.1	Hypothetical protein. (588 aa)
	KKB53726.1	Hypothetical protein. (414 aa)
	KKB53717.1	PAS domain S-box protein. (380 aa)
	KKB53570.1	Hypothetical protein. (791 aa)
	KKB53469.1	Hypothetical protein. (760 aa)
	KKB53462.1	Hypothetical protein. (1371 aa)
	KKB53408.1	Hypothetical protein. (910 aa)
	KKB53356.1	Hypothetical protein. (1360 aa)
	KKB54761.1	Hypothetical protein. (838 aa)
	KKB54760.1	Hypothetical protein. (116 aa)
	KKB54759.1	Hypothetical protein. (298 aa)
	KKB54677.1	Hypothetical protein. (418 aa)
	KKB54586.1	Hypothetical protein. (120 aa)
	KKB54585.1	Hypothetical protein. (785 aa)
	KKB54930.1	Hypothetical protein. (473 aa)
	KKB54929.1	Hypothetical protein. (227 aa)
	KKB54909.1	Hypothetical protein. (145 aa)
	KKB54908.1	Hypothetical protein. (252 aa)
	KKB54907.1	Hypothetical protein. (394 aa)
	KKB54766.1	Hypothetical protein. (385 aa)
	KKB56511.1	Hypothetical protein. (619 aa)
	KKB56474.1	Hypothetical protein. (1342 aa)
	KKB56449.1	Hypothetical protein. (213 aa)
	KKB56448.1	Hypothetical protein. (253 aa)
	KKB56446.1	Hypothetical protein. (381 aa)
	KKB56439.1	Hypothetical protein. (721 aa)
	KKB56438.1	Hypothetical protein. (698 aa)
	KKB56437.1	Hypothetical protein. (691 aa)
	KKB56435.1	Hypothetical protein. (131 aa)
	KKB56421.1	Hypothetical protein. (450 aa)
	KKB56420.1	Hypothetical protein. (232 aa)
	KKB56417.1	Hypothetical protein. (402 aa)
	KKB56416.1	Hypothetical protein. (231 aa)
	KKB56357.1	Hypothetical protein. (365 aa)
	KKB56356.1	Hypothetical protein. (250 aa)
	KKB56348.1	Hypothetical protein. (254 aa)
	KKB56295.1	Hypothetical protein. (517 aa)
	KKB56294.1	Transcriptional regulatory protein rprY. (243 aa)
	KKB56257.1	Hypothetical protein. (872 aa)
	KKB56242.1	Hypothetical protein. (636 aa)
	KKB56203.1	Hypothetical protein. (399 aa)
	KKB56147.1	Hypothetical protein. (328 aa)
	KKB56048.1	Hypothetical protein. (725 aa)
	KKB55992.1	Hypothetical protein. (516 aa)
	KKB55932.1	Hypothetical protein. (37 aa)
	KKB55931.1	Hypothetical protein. (104 aa)
	KKB57181.1	Hypothetical protein. (1356 aa)
	KKB57034.1	Hypothetical protein. (251 aa)
	KKB57033.1	Hypothetical protein. (867 aa)
	KKB56997.1	Hypothetical protein. (686 aa)
	KKB56897.1	Hypothetical protein. (359 aa)
	KKB56885.1	PAS domain S-box protein. (728 aa)
	KKB56761.1	Hypothetical protein. (1380 aa)
	KKB56758.1	Hypothetical protein. (280 aa)
	KKB56756.1	Hypothetical protein. (1350 aa)
	KKB57506.1	Hypothetical protein. (265 aa)
	KKB57458.1	Hypothetical protein. (1337 aa)
	KKB57816.1	Hypothetical protein. (1338 aa)
	KKB57776.1	Hypothetical protein. (689 aa)
	KKB57758.1	Hypothetical protein. (379 aa)
	KKB57648.1	Hypothetical protein. (890 aa)
	KKB58771.1	Hypothetical protein. (237 aa)
	KKB58770.1	Hypothetical protein. (355 aa)
	KKB58769.1	Hypothetical protein. (360 aa)
	KKB58757.1	Hypothetical protein. (345 aa)
	KKB58756.1	Hypothetical protein. (259 aa)
	KKB59036.1	Hypothetical protein. (1338 aa)
	KKB59493.1	Hypothetical protein. (387 aa)
	KKB59492.1	Hypothetical protein. (278 aa)
	KKB59491.1	Hypothetical protein. (373 aa)
	KKB60139.1	Hypothetical protein. (691 aa)
	KKB60055.1	Hypothetical protein. (422 aa)
	KKB60054.1	Hypothetical protein. (226 aa)
	KKB59903.1	Hypothetical protein. (1314 aa)

Your Current Organism:

Parabacteroides goldsteinii

NCBI taxonomy Id: 927665
Other names: P. goldsteinii DSM 19448 = WAL 12034, Parabacteroides goldsteinii DSM 19448, Parabacteroides goldsteinii DSM 19448 = WAL 12034, Parabacteroides goldsteinii JCM 13446, Parabacteroides goldsteinii WAL 12034, Parabacteroides goldsteinii WAL 12034 = DSM 19448

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KKB45155.1	KKB45659.1	HMPREF1535_05050	HMPREF1535_04943	Hypothetical protein.	Hypothetical protein.	0.665
KKB45155.1	KKB48169.1	HMPREF1535_05050	HMPREF1535_04253	Hypothetical protein.	PAS domain S-box protein.	0.665
KKB45155.1	KKB48547.1	HMPREF1535_05050	HMPREF1535_03775	Hypothetical protein.	PAS domain S-box protein.	0.665
KKB45155.1	KKB48632.1	HMPREF1535_05050	HMPREF1535_03860	Hypothetical protein.	PAS domain S-box protein.	0.665
KKB45155.1	KKB48639.1	HMPREF1535_05050	HMPREF1535_03867	Hypothetical protein.	PAS domain S-box protein.	0.690
KKB45155.1	KKB48669.1	HMPREF1535_05050	HMPREF1535_03897	Hypothetical protein.	Hypothetical protein.	0.665
KKB45155.1	KKB48874.1	HMPREF1535_05050	HMPREF1535_04103	Hypothetical protein.	Hypothetical protein.	0.591
KKB45155.1	KKB53273.1	HMPREF1535_05050	HMPREF1535_03499	Hypothetical protein.	Hypothetical protein.	0.916
KKB45155.1	KKB53356.1	HMPREF1535_05050	HMPREF1535_02895	Hypothetical protein.	Hypothetical protein.	0.791
KKB45155.1	KKB53408.1	HMPREF1535_05050	HMPREF1535_02949	Hypothetical protein.	Hypothetical protein.	0.826
KKB45155.1	KKB53462.1	HMPREF1535_05050	HMPREF1535_03003	Hypothetical protein.	Hypothetical protein.	0.791
KKB45155.1	KKB53469.1	HMPREF1535_05050	HMPREF1535_03010	Hypothetical protein.	Hypothetical protein.	0.665
KKB45155.1	KKB53570.1	HMPREF1535_05050	HMPREF1535_03112	Hypothetical protein.	Hypothetical protein.	0.665
KKB45155.1	KKB53717.1	HMPREF1535_05050	HMPREF1535_03265	Hypothetical protein.	PAS domain S-box protein.	0.665
KKB45155.1	KKB54585.1	HMPREF1535_05050	HMPREF1535_02707	Hypothetical protein.	Hypothetical protein.	0.907
KKB45155.1	KKB54759.1	HMPREF1535_05050	HMPREF1535_02884	Hypothetical protein.	Hypothetical protein.	0.791
KKB45155.1	KKB54760.1	HMPREF1535_05050	HMPREF1535_02885	Hypothetical protein.	Hypothetical protein.	0.791
KKB45155.1	KKB54761.1	HMPREF1535_05050	HMPREF1535_02886	Hypothetical protein.	Hypothetical protein.	0.791
KKB45155.1	KKB54766.1	HMPREF1535_05050	HMPREF1535_02519	Hypothetical protein.	Hypothetical protein.	0.579
KKB45155.1	KKB55992.1	HMPREF1535_05050	HMPREF1535_01965	Hypothetical protein.	Hypothetical protein.	0.717

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