STRINGSTRING
AFD05463.1 AFD05463.1 nrfA nrfA AFD07053.1 AFD07053.1 AFD07054.1 AFD07054.1 AFD07056.1 AFD07056.1 AFD08161.1 AFD08161.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFD05463.1Cytochrome c nitrate reductase, small subunit; PFAM: NapC/NirT cytochrome c family, N-terminal region. (200 aa)
nrfAFormate-dependent nitrite reductase, periplasmic cytochrome c552 subunit; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family. (505 aa)
AFD07053.1Nitrate/nitrite transporter; PFAM: Major Facilitator Superfamily. (447 aa)
AFD07054.1Nitrate/nitrite transporter; PFAM: Major Facilitator Superfamily. (494 aa)
AFD07056.1Putative anaerobic dehydrogenase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (738 aa)
AFD08161.12-nitropropane dioxygenase-like enzyme; PFAM: 2-nitropropane dioxygenase. (379 aa)
Your Current Organism:
Solitalea canadensis
NCBI taxonomy Id: 929556
Other names: S. canadensis DSM 3403, Solitalea canadensis DSM 3403, Solitalea canadensis IFO 15130, Solitalea canadensis NBRC 15130, Solitalea canadensis str. DSM 3403, Solitalea canadensis strain DSM 3403
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