STRINGSTRING
AFD09246.1 AFD09246.1 AFD09259.1 AFD09259.1 AFD09280.1 AFD09280.1 AFD09313.1 AFD09313.1 AFD09337.1 AFD09337.1 AFD09356.1 AFD09356.1 AFD09358.1 AFD09358.1 AFD09359.1 AFD09359.1 AFD09402.1 AFD09402.1 AFD09467.1 AFD09467.1 AFD09108.1 AFD09108.1 AFD06257.1 AFD06257.1 AFD06306.1 AFD06306.1 AFD06360.1 AFD06360.1 lgt lgt AFD06486.1 AFD06486.1 AFD06524.1 AFD06524.1 AFD06685.1 AFD06685.1 AFD06787.1 AFD06787.1 mltG mltG queA queA AFD07307.1 AFD07307.1 tgt tgt AFD07346.1 AFD07346.1 AFD07362.1 AFD07362.1 AFD07474.1 AFD07474.1 AFD07495.1 AFD07495.1 AFD07545.1 AFD07545.1 murG murG AFD07771.1 AFD07771.1 AFD07892.1 AFD07892.1 pncB pncB AFD07961.1 AFD07961.1 AFD07991.1 AFD07991.1 AFD08009.1 AFD08009.1 AFD08010.1 AFD08010.1 AFD06051.1 AFD06051.1 AFD08014.1 AFD08014.1 AFD08108.1 AFD08108.1 AFD08182.1 AFD08182.1 AFD08185.1 AFD08185.1 AFD08187.1 AFD08187.1 AFD08224.1 AFD08224.1 AFD08313.1 AFD08313.1 AFD08398.1 AFD08398.1 AFD08486.1 AFD08486.1 AFD08488.1 AFD08488.1 AFD08489.1 AFD08489.1 AFD08506.1 AFD08506.1 AFD08573.1 AFD08573.1 rlpA rlpA AFD08908.1 AFD08908.1 AFD06196.1 AFD06196.1 AFD09130.1 AFD09130.1 AFD09152.1 AFD09152.1 AFD05259.1 AFD05259.1 mtgA mtgA AFD05492.1 AFD05492.1 AFD05509.1 AFD05509.1 apt apt glgB glgB AFD05771.1 AFD05771.1 AFD05802.1 AFD05802.1 kptA kptA pyrE pyrE hisF hisF hisH hisH hisG hisG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFD09246.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (416 aa)
AFD09259.1Hypothetical protein. (390 aa)
AFD09280.1TIGRFAM: conserved hypothetical protein. (329 aa)
AFD09313.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (389 aa)
AFD09337.1Soluble lytic murein transglycosylase-like protein; PFAM: Transglycosylase SLT domain; LysM domain. (488 aa)
AFD09356.1PFAM: Glycosyl transferases group 1; TIGRFAM: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA. (380 aa)
AFD09358.1Soluble lytic murein transglycosylase-like protein; PFAM: Transglycosylase SLT domain. (306 aa)
AFD09359.1Soluble lytic murein transglycosylase-like protein; PFAM: Transglycosylase SLT domain. (285 aa)
AFD09402.1Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain. (168 aa)
AFD09467.13-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. (412 aa)
AFD09108.1Nicotinic acid phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; Belongs to the NAPRTase family. (469 aa)
AFD06257.1Glycosyltransferase; PFAM: Glycogen synthase. (604 aa)
AFD06306.1PFAM: Penicillin-Binding Protein C-terminus Family; Penicillin binding protein transpeptidase domain; Transglycosylase. (803 aa)
AFD06360.1Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). (333 aa)
lgtProlipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. (271 aa)
AFD06486.1Membrane carboxypeptidase/penicillin-binding protein; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase. (779 aa)
AFD06524.1PFAM: Glycosyl transferase family 2. (244 aa)
AFD06685.1Trehalose/maltose hydrolase or phosphorylase; PFAM: Glycosyl hydrolase family 65 central catalytic domain. (810 aa)
AFD06787.11,4-alpha-glucan branching enzyme; PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Belongs to the glycosyl hydrolase 13 family. (877 aa)
mltGHypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. (335 aa)
queAS-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (349 aa)
AFD07307.1PFAM: Glycosyltransferase family 9 (heptosyltransferase). (329 aa)
tgttRNA-guanine transglycosylase, queuosine-34-forming; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of [...] (376 aa)
AFD07346.1Glycosidase; PFAM: Alpha amylase, catalytic domain. (469 aa)
AFD07362.1Trehalose/maltose hydrolase or phosphorylase; PFAM: Glycosyl hydrolase family 65, C-terminal domain; Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain. (773 aa)
AFD07474.1PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase. (540 aa)
AFD07495.1Nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; Belongs to the NadC/ModD family. (284 aa)
AFD07545.1Putative glycosylase; Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man-Glc) to mannose 1-phosphate (Man1P) and glucose; Belongs to the glycosyl hydrolase 130 family. (393 aa)
murGUndecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (370 aa)
AFD07771.1Bacterial cell division membrane protein; PFAM: Cell cycle protein; Belongs to the SEDS family. (379 aa)
AFD07892.1lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (371 aa)
pncBNicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. (396 aa)
AFD07961.1Hypothetical protein. (366 aa)
AFD07991.1Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. (271 aa)
AFD08009.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (358 aa)
AFD08010.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (394 aa)
AFD06051.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (405 aa)
AFD08014.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (407 aa)
AFD08108.1PFAM: UDP-glucoronosyl and UDP-glucosyl transferase. (496 aa)
AFD08182.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (375 aa)
AFD08185.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (408 aa)
AFD08187.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (395 aa)
AFD08224.1PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase. (565 aa)
AFD08313.1Membrane carboxypeptidase/penicillin-binding protein; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase. (753 aa)
AFD08398.1PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. (176 aa)
AFD08486.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (382 aa)
AFD08488.1Hypothetical protein. (367 aa)
AFD08489.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (382 aa)
AFD08506.1PFAM: Starch synthase catalytic domain. (273 aa)
AFD08573.1PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase. (528 aa)
rlpARare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (125 aa)
AFD08908.1Hypothetical protein. (762 aa)
AFD06196.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (375 aa)
AFD09130.1Transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family. (707 aa)
AFD09152.1PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase. (214 aa)
AFD05259.1Trehalose/maltose hydrolase or phosphorylase; PFAM: Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain. (692 aa)
mtgAMonofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. (228 aa)
AFD05492.1Rod shape-determining protein RodA; PFAM: Cell cycle protein; Belongs to the SEDS family. (422 aa)
AFD05509.1PFAM: Carbohydrate phosphorylase. (552 aa)
aptAdenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. (177 aa)
glgBAlpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (669 aa)
AFD05771.1PFAM: Glutamine amidotransferases class-II. (633 aa)
AFD05802.1Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain. (180 aa)
kptARNA:NAD 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. (180 aa)
pyrEOrotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). (213 aa)
hisFImidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. (374 aa)
hisHImidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. (208 aa)
hisGATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily. (283 aa)
Your Current Organism:
Solitalea canadensis
NCBI taxonomy Id: 929556
Other names: S. canadensis DSM 3403, Solitalea canadensis DSM 3403, Solitalea canadensis IFO 15130, Solitalea canadensis NBRC 15130, Solitalea canadensis str. DSM 3403, Solitalea canadensis strain DSM 3403
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