STRINGSTRING
AFD05783.1 AFD05783.1 AFD05256.1 AFD05256.1 AFD05881.1 AFD05881.1 AFD07348.1 AFD07348.1 AFD07347.1 AFD07347.1 AFD06786.1 AFD06786.1 AFD06785.1 AFD06785.1 AFD06301.1 AFD06301.1 AFD06181.1 AFD06181.1 AFD06154.1 AFD06154.1 AFD05883.1 AFD05883.1 AFD07543.1 AFD07543.1 AFD07536.1 AFD07536.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFD05783.1TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor. (1026 aa)
AFD05256.1TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain. (1099 aa)
AFD05881.1TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor. (1023 aa)
AFD07348.1RagB/SusD family protein; PFAM: SusD family. (531 aa)
AFD07347.1Hypothetical protein. (356 aa)
AFD06786.1Hypothetical protein. (360 aa)
AFD06785.1RagB/SusD family protein; PFAM: SusD family. (528 aa)
AFD06301.1Hypothetical protein. (178 aa)
AFD06181.1Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 5 (cellulase A) family. (571 aa)
AFD06154.1TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor. (1099 aa)
AFD05883.1Hypothetical protein. (489 aa)
AFD07543.1TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor. (1041 aa)
AFD07536.1Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family. (332 aa)
Your Current Organism:
Solitalea canadensis
NCBI taxonomy Id: 929556
Other names: S. canadensis DSM 3403, Solitalea canadensis DSM 3403, Solitalea canadensis IFO 15130, Solitalea canadensis NBRC 15130, Solitalea canadensis str. DSM 3403, Solitalea canadensis strain DSM 3403
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.