STRINGSTRING
AFD09423.1 AFD09423.1 AFD05272.1 AFD05272.1 AFD05501.1 AFD05501.1 AFD06570.1 AFD06570.1 AFD06588.1 AFD06588.1 AFD06610.1 AFD06610.1 AFD07587.1 AFD07587.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFD09423.1PFAM: Bacterial regulatory proteins, gntR family; FCD domain. (222 aa)
AFD05272.1Transcriptional regulator with HTH domain and aminotransferase domain; PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family. (488 aa)
AFD05501.1PFAM: Bacterial regulatory proteins, gntR family. (225 aa)
AFD06570.1Transcriptional regulator with HTH domain and aminotransferase domain; PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family. (471 aa)
AFD06588.1PFAM: Bacterial regulatory proteins, gntR family. (338 aa)
AFD06610.1PFAM: Bacterial regulatory proteins, gntR family; UTRA domain. (246 aa)
AFD07587.1Transcriptional regulator with HTH domain and aminotransferase domain; PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II. (479 aa)
Your Current Organism:
Solitalea canadensis
NCBI taxonomy Id: 929556
Other names: S. canadensis DSM 3403, Solitalea canadensis DSM 3403, Solitalea canadensis IFO 15130, Solitalea canadensis NBRC 15130, Solitalea canadensis str. DSM 3403, Solitalea canadensis strain DSM 3403
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