15 items (Bipolaris zeicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W6XY82_COCCA	DUF2439 domain-containing protein. (800 aa)
	W6XZ05_COCCA	Uncharacterized protein. (353 aa)
	W6Y000_COCCA	Uncharacterized protein. (153 aa)
	W6Y283_COCCA	Mago-bind domain-containing protein. (200 aa)
	W6Y9B7_COCCA	RRM domain-containing protein. (337 aa)
	W6YEK7_COCCA	RRM domain-containing protein. (158 aa)
	W6YIP1_COCCA	PWI domain-containing protein. (328 aa)
	W6YJN7_COCCA	Uncharacterized protein. (845 aa)
	W6YJQ7_COCCA	RRM domain-containing protein. (618 aa)
	W6YKP8_COCCA	SAP domain-containing protein. (662 aa)
	W6YNN0_COCCA	Uncharacterized protein. (265 aa)
	W6YP02_COCCA	Pinin_SDK_memA domain-containing protein. (315 aa)
	W6YPJ0_COCCA	Uncharacterized protein; Belongs to the DEAD box helicase family. (399 aa)
	W6YU78_COCCA	Uncharacterized protein. (1204 aa)
	COCCADRAFT_233	Uncharacterized protein. (1493 aa)

Your Current Organism:

Bipolaris zeicola

NCBI taxonomy Id: 930089
Other names: B. zeicola 26-R-13, Bipolaris zeicola 26-R-13, Cochliobolus carbonum 26-R-13

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COCCADRAFT_233	W6XZ05_COCCA	W6YUH9	W6XZ05	Uncharacterized protein.	Uncharacterized protein.	0.454
COCCADRAFT_233	W6Y000_COCCA	W6YUH9	W6Y000	Uncharacterized protein.	Uncharacterized protein.	0.502
COCCADRAFT_233	W6Y9B7_COCCA	W6YUH9	W6Y9B7	Uncharacterized protein.	RRM domain-containing protein.	0.454
COCCADRAFT_233	W6YEK7_COCCA	W6YUH9	W6YEK7	Uncharacterized protein.	RRM domain-containing protein.	0.728
COCCADRAFT_233	W6YIP1_COCCA	W6YUH9	W6YIP1	Uncharacterized protein.	PWI domain-containing protein.	0.463
COCCADRAFT_233	W6YJN7_COCCA	W6YUH9	W6YJN7	Uncharacterized protein.	Uncharacterized protein.	0.850
COCCADRAFT_233	W6YJQ7_COCCA	W6YUH9	W6YJQ7	Uncharacterized protein.	RRM domain-containing protein.	0.898
COCCADRAFT_233	W6YPJ0_COCCA	W6YUH9	W6YPJ0	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.567
COCCADRAFT_233	W6YU78_COCCA	W6YUH9	W6YU78	Uncharacterized protein.	Uncharacterized protein.	0.902
W6XY82_COCCA	W6XZ05_COCCA	W6XY82	W6XZ05	DUF2439 domain-containing protein.	Uncharacterized protein.	0.454
W6XY82_COCCA	W6Y000_COCCA	W6XY82	W6Y000	DUF2439 domain-containing protein.	Uncharacterized protein.	0.502
W6XY82_COCCA	W6Y9B7_COCCA	W6XY82	W6Y9B7	DUF2439 domain-containing protein.	RRM domain-containing protein.	0.454
W6XY82_COCCA	W6YEK7_COCCA	W6XY82	W6YEK7	DUF2439 domain-containing protein.	RRM domain-containing protein.	0.728
W6XY82_COCCA	W6YIP1_COCCA	W6XY82	W6YIP1	DUF2439 domain-containing protein.	PWI domain-containing protein.	0.463
W6XY82_COCCA	W6YJN7_COCCA	W6XY82	W6YJN7	DUF2439 domain-containing protein.	Uncharacterized protein.	0.850
W6XY82_COCCA	W6YJQ7_COCCA	W6XY82	W6YJQ7	DUF2439 domain-containing protein.	RRM domain-containing protein.	0.898
W6XY82_COCCA	W6YPJ0_COCCA	W6XY82	W6YPJ0	DUF2439 domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.567
W6XY82_COCCA	W6YU78_COCCA	W6XY82	W6YU78	DUF2439 domain-containing protein.	Uncharacterized protein.	0.902
W6XZ05_COCCA	COCCADRAFT_233	W6XZ05	W6YUH9	Uncharacterized protein.	Uncharacterized protein.	0.454
W6XZ05_COCCA	W6XY82_COCCA	W6XZ05	W6XY82	Uncharacterized protein.	DUF2439 domain-containing protein.	0.454