17 items (Bipolaris zeicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W6XP11_COCCA	WD_REPEATS_REGION domain-containing protein. (1249 aa)
	W6XS79_COCCA	DDHD domain-containing protein. (943 aa)
	W6XX13_COCCA	DDHD domain-containing protein. (1004 aa)
	W6XZC1_COCCA	Uncharacterized protein. (630 aa)
	W6Y8V3_COCCA	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (775 aa)
	W6Y8Y6_COCCA	Uncharacterized protein. (884 aa)
	W6YAE0_COCCA	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (185 aa)
	W6YBX9_COCCA	Uncharacterized protein. (342 aa)
	W6YCP3_COCCA	Uncharacterized protein. (1024 aa)
	W6YD21_COCCA	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (298 aa)
	W6YDN4_COCCA	Uncharacterized protein. (80 aa)
	W6YEN8_COCCA	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family. (1823 aa)
	W6YEV7_COCCA	Uncharacterized protein. (1026 aa)
	W6YFK7_COCCA	GFA domain-containing protein. (351 aa)
	W6YH71_COCCA	Uncharacterized protein. (138 aa)
	COCCADRAFT_585	Uncharacterized protein. (771 aa)
	W6YSC5_COCCA	L-type lectin-like domain-containing protein. (322 aa)

Your Current Organism:

Bipolaris zeicola

NCBI taxonomy Id: 930089
Other names: B. zeicola 26-R-13, Bipolaris zeicola 26-R-13, Cochliobolus carbonum 26-R-13

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COCCADRAFT_585	W6XP11_COCCA	W6YHT6	W6XP11	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.939
COCCADRAFT_585	W6XZC1_COCCA	W6YHT6	W6XZC1	Uncharacterized protein.	Uncharacterized protein.	0.920
COCCADRAFT_585	W6Y8V3_COCCA	W6YHT6	W6Y8V3	Uncharacterized protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.964
COCCADRAFT_585	W6Y8Y6_COCCA	W6YHT6	W6Y8Y6	Uncharacterized protein.	Uncharacterized protein.	0.916
COCCADRAFT_585	W6YBX9_COCCA	W6YHT6	W6YBX9	Uncharacterized protein.	Uncharacterized protein.	0.860
COCCADRAFT_585	W6YCP3_COCCA	W6YHT6	W6YCP3	Uncharacterized protein.	Uncharacterized protein.	0.769
COCCADRAFT_585	W6YD21_COCCA	W6YHT6	W6YD21	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.812
COCCADRAFT_585	W6YDN4_COCCA	W6YHT6	W6YDN4	Uncharacterized protein.	Uncharacterized protein.	0.824
COCCADRAFT_585	W6YEN8_COCCA	W6YHT6	W6YEN8	Uncharacterized protein.	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.	0.887
COCCADRAFT_585	W6YEV7_COCCA	W6YHT6	W6YEV7	Uncharacterized protein.	Uncharacterized protein.	0.642
COCCADRAFT_585	W6YFK7_COCCA	W6YHT6	W6YFK7	Uncharacterized protein.	GFA domain-containing protein.	0.823
COCCADRAFT_585	W6YH71_COCCA	W6YHT6	W6YH71	Uncharacterized protein.	Uncharacterized protein.	0.658
COCCADRAFT_585	W6YSC5_COCCA	W6YHT6	W6YSC5	Uncharacterized protein.	L-type lectin-like domain-containing protein.	0.611
W6XP11_COCCA	COCCADRAFT_585	W6XP11	W6YHT6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.939
W6XP11_COCCA	W6XS79_COCCA	W6XP11	W6XS79	WD_REPEATS_REGION domain-containing protein.	DDHD domain-containing protein.	0.689
W6XP11_COCCA	W6XX13_COCCA	W6XP11	W6XX13	WD_REPEATS_REGION domain-containing protein.	DDHD domain-containing protein.	0.689
W6XP11_COCCA	W6XZC1_COCCA	W6XP11	W6XZC1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.664
W6XP11_COCCA	W6Y8V3_COCCA	W6XP11	W6Y8V3	WD_REPEATS_REGION domain-containing protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.999
W6XP11_COCCA	W6Y8Y6_COCCA	W6XP11	W6Y8Y6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.999
W6XP11_COCCA	W6YAE0_COCCA	W6XP11	W6YAE0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.993