48 items (Bipolaris zeicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W6XQ01_COCCA	Uncharacterized protein. (81 aa)
	W6XR08_COCCA	Uncharacterized protein. (222 aa)
	W6XSP2_COCCA	DUF2263 domain-containing protein. (452 aa)
	W6XSY8_COCCA	Uncharacterized protein. (354 aa)
	W6XVV1_COCCA	Uncharacterized protein. (129 aa)
	W6XWM6_COCCA	Uncharacterized protein. (59 aa)
	W6XZJ5_COCCA	Uncharacterized protein. (765 aa)
	W6XZM7_COCCA	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family. (333 aa)
	W6Y041_COCCA	Uncharacterized protein. (93 aa)
	W6Y1Z7_COCCA	Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport. (90 aa)
	W6Y322_COCCA	Uncharacterized protein. (226 aa)
	W6Y4C0_COCCA	Uncharacterized protein; Belongs to the AAA ATPase family. (573 aa)
	W6Z2G5_COCCA	Uncharacterized protein; Belongs to the complex I LYR family. (111 aa)
	W6Z0D8_COCCA	Uncharacterized protein; Belongs to the AAA ATPase family. (486 aa)
	W6YZM5_COCCA	Uncharacterized protein. (83 aa)
	W6YTT5_COCCA	Uncharacterized protein. (212 aa)
	W6YSQ4_COCCA	Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I). (528 aa)
	W6YP81_COCCA	Cytochrome c oxidase assembly protein COX20, mitochondrial; Involved in the assembly of the cytochrome c oxidase complex. Belongs to the COX20 family. (180 aa)
	W6YNZ7_COCCA	Uncharacterized protein. (306 aa)
	W6YNX5_COCCA	Uncharacterized protein. (147 aa)
	W6YNW6_COCCA	Uncharacterized protein. (597 aa)
	W6YN96_COCCA	L51_S25_CI-B8 domain-containing protein. (93 aa)
	W6YK56_COCCA	Uncharacterized protein. (67 aa)
	W6YK52_COCCA	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (115 aa)
	W6YK24_COCCA	Uncharacterized protein. (104 aa)
	W6YIP5_COCCA	Uncharacterized protein. (384 aa)
	W6YGX0_COCCA	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (189 aa)
	W6YFS1_COCCA	Uncharacterized protein. (87 aa)
	W6YEG0_COCCA	Uncharacterized protein. (172 aa)
	W6YEE7_COCCA	Uncharacterized protein. (77 aa)
	W6YE59_COCCA	Uncharacterized protein. (313 aa)
	W6YDP2_COCCA	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. (131 aa)
	W6YD86_COCCA	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family. (220 aa)
	W6YCF0_COCCA	Uncharacterized protein. (297 aa)
	W6YCB2_COCCA	Uncharacterized protein. (119 aa)
	W6YC95_COCCA	Uncharacterized protein. (121 aa)
	W6YBW0_COCCA	Uncharacterized protein. (116 aa)
	W6Y700_COCCA	Uncharacterized protein. (161 aa)
	W6Y4T3_COCCA	Uncharacterized protein. (230 aa)
	W6Y736_COCCA	HIG1 domain-containing protein. (239 aa)
	W6YNK8_COCCA	zf-Mss51 domain-containing protein. (512 aa)
	W6YAD7_COCCA	Uncharacterized protein. (236 aa)
	W6Y8N2_COCCA	COX assembly mitochondrial protein; Required for mitochondrial cytochrome c oxidase (COX) assembly and respiration; Belongs to the CMC family. (81 aa)
	W6Y7U1_COCCA	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family. (231 aa)
	W6Y867_COCCA	Uncharacterized protein; Belongs to the AAA ATPase family. (636 aa)
	W6Y5X9_COCCA	Uncharacterized protein; Belongs to the complex I LYR family. (79 aa)
	W6XNA1_COCCA	COX assembly mitochondrial protein; Required for mitochondrial cytochrome c oxidase (COX) assembly and respiration; Belongs to the CMC family. (160 aa)
	W6XN43_COCCA	Uncharacterized protein. (67 aa)

Your Current Organism:

Bipolaris zeicola

NCBI taxonomy Id: 930089
Other names: B. zeicola 26-R-13, Bipolaris zeicola 26-R-13, Cochliobolus carbonum 26-R-13

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W6XNA1_COCCA	W6XVV1_COCCA	W6XNA1	W6XVV1	COX assembly mitochondrial protein; Required for mitochondrial cytochrome c oxidase (COX) assembly and respiration; Belongs to the CMC family.	Uncharacterized protein.	0.536
W6XNA1_COCCA	W6Y041_COCCA	W6XNA1	W6Y041	COX assembly mitochondrial protein; Required for mitochondrial cytochrome c oxidase (COX) assembly and respiration; Belongs to the CMC family.	Uncharacterized protein.	0.440
W6XNA1_COCCA	W6YK56_COCCA	W6XNA1	W6YK56	COX assembly mitochondrial protein; Required for mitochondrial cytochrome c oxidase (COX) assembly and respiration; Belongs to the CMC family.	Uncharacterized protein.	0.556
W6XQ01_COCCA	W6XSY8_COCCA	W6XQ01	W6XSY8	Uncharacterized protein.	Uncharacterized protein.	0.707
W6XQ01_COCCA	W6XZJ5_COCCA	W6XQ01	W6XZJ5	Uncharacterized protein.	Uncharacterized protein.	0.977
W6XQ01_COCCA	W6Y041_COCCA	W6XQ01	W6Y041	Uncharacterized protein.	Uncharacterized protein.	0.999
W6XQ01_COCCA	W6Y1Z7_COCCA	W6XQ01	W6Y1Z7	Uncharacterized protein.	Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.	0.720
W6XQ01_COCCA	W6Y322_COCCA	W6XQ01	W6Y322	Uncharacterized protein.	Uncharacterized protein.	0.867
W6XQ01_COCCA	W6Y4T3_COCCA	W6XQ01	W6Y4T3	Uncharacterized protein.	Uncharacterized protein.	0.998
W6XQ01_COCCA	W6Y700_COCCA	W6XQ01	W6Y700	Uncharacterized protein.	Uncharacterized protein.	0.977
W6XQ01_COCCA	W6Y7U1_COCCA	W6XQ01	W6Y7U1	Uncharacterized protein.	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	0.961
W6XQ01_COCCA	W6YAD7_COCCA	W6XQ01	W6YAD7	Uncharacterized protein.	Uncharacterized protein.	0.686
W6XQ01_COCCA	W6YC95_COCCA	W6XQ01	W6YC95	Uncharacterized protein.	Uncharacterized protein.	0.720
W6XQ01_COCCA	W6YCB2_COCCA	W6XQ01	W6YCB2	Uncharacterized protein.	Uncharacterized protein.	0.999
W6XQ01_COCCA	W6YD86_COCCA	W6XQ01	W6YD86	Uncharacterized protein.	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	0.961
W6XQ01_COCCA	W6YDP2_COCCA	W6XQ01	W6YDP2	Uncharacterized protein.	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	0.953
W6XQ01_COCCA	W6YGX0_COCCA	W6XQ01	W6YGX0	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.800
W6XQ01_COCCA	W6YIP5_COCCA	W6XQ01	W6YIP5	Uncharacterized protein.	Uncharacterized protein.	0.683
W6XQ01_COCCA	W6YK24_COCCA	W6XQ01	W6YK24	Uncharacterized protein.	Uncharacterized protein.	0.999
W6XQ01_COCCA	W6YK52_COCCA	W6XQ01	W6YK52	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999