44 items (Bipolaris zeicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W6YP02_COCCA	Pinin_SDK_memA domain-containing protein. (315 aa)
	W6Z3S8_COCCA	Uncharacterized protein. (235 aa)
	W6YUC7_COCCA	Uncharacterized protein. (314 aa)
	W6YRA1_COCCA	G-patch domain-containing protein. (714 aa)
	W6YQ88_COCCA	Uncharacterized protein. (520 aa)
	W6YJH9_COCCA	Uncharacterized protein. (704 aa)
	W6YH19_COCCA	WD_REPEATS_REGION domain-containing protein. (334 aa)
	W6YGN1_COCCA	Suf domain-containing protein. (547 aa)
	W6YFX4_COCCA	RRM domain-containing protein. (224 aa)
	W6YF19_COCCA	Uncharacterized protein. (222 aa)
	W6YEN0_COCCA	Uncharacterized protein. (489 aa)
	W6YEK7_COCCA	RRM domain-containing protein. (158 aa)
	W6YD63_COCCA	Uncharacterized protein. (419 aa)
	W6YBP2_COCCA	J domain-containing protein. (213 aa)
	W6YBA0_COCCA	Matrin-type domain-containing protein. (57 aa)
	W6Y8W2_COCCA	Tudor domain-containing protein. (301 aa)
	W6Y7V0_COCCA	Uncharacterized protein. (751 aa)
	W6Y788_COCCA	Uncharacterized protein. (183 aa)
	W6Y6D5_COCCA	Uncharacterized protein. (608 aa)
	W6Y606_COCCA	Uncharacterized protein. (700 aa)
	W6Y5M3_COCCA	Sde2_N_Ubi domain-containing protein. (272 aa)
	W6Y490_COCCA	WD_REPEATS_REGION domain-containing protein. (359 aa)
	W6Y414_COCCA	Uncharacterized protein. (215 aa)
	W6Y413_COCCA	MPN domain-containing protein. (2922 aa)
	W6Y3D2_COCCA	U1-type domain-containing protein. (279 aa)
	W6Y278_COCCA	Uncharacterized protein. (77 aa)
	W6Y144_COCCA	Uncharacterized protein. (374 aa)
	W6Y0T9_COCCA	Matrin-type domain-containing protein. (498 aa)
	W6Y000_COCCA	Uncharacterized protein. (153 aa)
	W6XZR1_COCCA	Uncharacterized protein. (404 aa)
	W6XZE9_COCCA	Uncharacterized protein. (266 aa)
	W6XZD4_COCCA	Uncharacterized protein. (355 aa)
	W6XYJ5_COCCA	Uncharacterized protein. (531 aa)
	W6XXN5_COCCA	Uncharacterized protein. (520 aa)
	W6XX08_COCCA	Nuclear cap-binding protein subunit 2. (168 aa)
	W6XW73_COCCA	Zn(2)-C6 fungal-type domain-containing protein. (742 aa)
	W6XV77_COCCA	Uncharacterized protein. (676 aa)
	W6XUL6_COCCA	Uncharacterized protein. (714 aa)
	W6XTE0_COCCA	Protein kinase domain-containing protein. (811 aa)
	W6XRZ6_COCCA	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1449 aa)
	W6XQX1_COCCA	Uncharacterized protein. (569 aa)
	W6XQU7_COCCA	DUF2040 domain-containing protein. (413 aa)
	W6XQQ6_COCCA	DUF1716 domain-containing protein. (611 aa)
	W6XNH1_COCCA	Uncharacterized protein. (583 aa)

Your Current Organism:

Bipolaris zeicola

NCBI taxonomy Id: 930089
Other names: B. zeicola 26-R-13, Bipolaris zeicola 26-R-13, Cochliobolus carbonum 26-R-13

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W6XNH1_COCCA	W6XQX1_COCCA	W6XNH1	W6XQX1	Uncharacterized protein.	Uncharacterized protein.	0.649
W6XNH1_COCCA	W6XTE0_COCCA	W6XNH1	W6XTE0	Uncharacterized protein.	Protein kinase domain-containing protein.	0.787
W6XNH1_COCCA	W6XW73_COCCA	W6XNH1	W6XW73	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.529
W6XNH1_COCCA	W6XXN5_COCCA	W6XNH1	W6XXN5	Uncharacterized protein.	Uncharacterized protein.	0.991
W6XNH1_COCCA	W6XZR1_COCCA	W6XNH1	W6XZR1	Uncharacterized protein.	Uncharacterized protein.	0.961
W6XNH1_COCCA	W6Y0T9_COCCA	W6XNH1	W6Y0T9	Uncharacterized protein.	Matrin-type domain-containing protein.	0.991
W6XNH1_COCCA	W6Y278_COCCA	W6XNH1	W6Y278	Uncharacterized protein.	Uncharacterized protein.	0.752
W6XNH1_COCCA	W6Y413_COCCA	W6XNH1	W6Y413	Uncharacterized protein.	MPN domain-containing protein.	0.987
W6XNH1_COCCA	W6Y414_COCCA	W6XNH1	W6Y414	Uncharacterized protein.	Uncharacterized protein.	0.954
W6XNH1_COCCA	W6Y490_COCCA	W6XNH1	W6Y490	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.985
W6XNH1_COCCA	W6Y606_COCCA	W6XNH1	W6Y606	Uncharacterized protein.	Uncharacterized protein.	0.954
W6XNH1_COCCA	W6Y7V0_COCCA	W6XNH1	W6Y7V0	Uncharacterized protein.	Uncharacterized protein.	0.846
W6XNH1_COCCA	W6YF19_COCCA	W6XNH1	W6YF19	Uncharacterized protein.	Uncharacterized protein.	0.951
W6XNH1_COCCA	W6YJH9_COCCA	W6XNH1	W6YJH9	Uncharacterized protein.	Uncharacterized protein.	0.638
W6XNH1_COCCA	W6YUC7_COCCA	W6XNH1	W6YUC7	Uncharacterized protein.	Uncharacterized protein.	0.962
W6XNH1_COCCA	W6Z3S8_COCCA	W6XNH1	W6Z3S8	Uncharacterized protein.	Uncharacterized protein.	0.986
W6XQQ6_COCCA	W6XQU7_COCCA	W6XQQ6	W6XQU7	DUF1716 domain-containing protein.	DUF2040 domain-containing protein.	0.506
W6XQQ6_COCCA	W6XRZ6_COCCA	W6XQQ6	W6XRZ6	DUF1716 domain-containing protein.	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	0.483
W6XQQ6_COCCA	W6XW73_COCCA	W6XQQ6	W6XW73	DUF1716 domain-containing protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.955
W6XQQ6_COCCA	W6XXN5_COCCA	W6XQQ6	W6XXN5	DUF1716 domain-containing protein.	Uncharacterized protein.	0.692