66 items (Bipolaris zeicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W6XPJ7_COCCA	RRM domain-containing protein. (554 aa)
	W6XPQ9_COCCA	RRM domain-containing protein. (317 aa)
	W6XQX1_COCCA	Uncharacterized protein. (569 aa)
	W6XSB4_COCCA	Uncharacterized protein. (334 aa)
	W6XTV0_COCCA	RRM domain-containing protein. (652 aa)
	W6XVZ3_COCCA	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (575 aa)
	W6XW93_COCCA	Uncharacterized protein. (762 aa)
	W6XWH7_COCCA	RRM domain-containing protein. (108 aa)
	W6XX08_COCCA	Nuclear cap-binding protein subunit 2. (168 aa)
	W6XX61_COCCA	RRM domain-containing protein. (304 aa)
	W6XX65_COCCA	Uncharacterized protein. (377 aa)
	W6XX79_COCCA	Uncharacterized protein. (487 aa)
	W6XXM6_COCCA	Uncharacterized protein. (244 aa)
	W6XY06_COCCA	RRM domain-containing protein. (180 aa)
	W6XYI5_COCCA	RRM domain-containing protein. (439 aa)
	W6XZR1_COCCA	Uncharacterized protein. (404 aa)
	W6XZR6_COCCA	Uncharacterized protein. (211 aa)
	W6Y1C9_COCCA	Uncharacterized protein. (331 aa)
	W6Y1K0_COCCA	Uncharacterized protein. (323 aa)
	W6Y1M8_COCCA	RRM domain-containing protein. (318 aa)
	W6Y3B2_COCCA	RRM domain-containing protein. (523 aa)
	W6Y4D8_COCCA	Uncharacterized protein. (593 aa)
	W6Y5G2_COCCA	RRM domain-containing protein. (253 aa)
	W6Y690_COCCA	Uncharacterized protein. (469 aa)
	W6Y6I4_COCCA	Uncharacterized protein. (828 aa)
	W6Y7F0_COCCA	Uncharacterized protein. (427 aa)
	W6Y7V0_COCCA	Uncharacterized protein. (751 aa)
	W6Y859_COCCA	RRM domain-containing protein. (328 aa)
	W6Y8R4_COCCA	Uncharacterized protein. (489 aa)
	W6Y9B7_COCCA	RRM domain-containing protein. (337 aa)
	W6Y9X1_COCCA	RRM domain-containing protein. (446 aa)
	W6YAJ6_COCCA	RRM domain-containing protein. (320 aa)
	W6YAK1_COCCA	Uncharacterized protein. (528 aa)
	W6YCR4_COCCA	RRM domain-containing protein. (115 aa)
	W6YD57_COCCA	RRM domain-containing protein. (155 aa)
	W6YEK5_COCCA	RRM domain-containing protein. (845 aa)
	W6YEK7_COCCA	RRM domain-containing protein. (158 aa)
	W6YFG6_COCCA	Uncharacterized protein. (466 aa)
	W6YFX4_COCCA	RRM domain-containing protein. (224 aa)
	TIF35	Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (282 aa)
	W6YGP6_COCCA	Uncharacterized protein. (660 aa)
	W6YH56_COCCA	RRM domain-containing protein. (253 aa)
	W6YHT2_COCCA	Uncharacterized protein. (822 aa)
	W6YHU2_COCCA	Uncharacterized protein. (168 aa)
	W6YIU6_COCCA	Uncharacterized protein. (850 aa)
	W6YJ60_COCCA	Uncharacterized protein. (571 aa)
	W6YJM6_COCCA	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (477 aa)
	W6YJQ7_COCCA	RRM domain-containing protein. (618 aa)
	W6YJV0_COCCA	RRM domain-containing protein. (387 aa)
	PRT1	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (741 aa)
	W6YJZ3_COCCA	Uncharacterized protein. (473 aa)
	W6YK09_COCCA	RRM domain-containing protein. (317 aa)
	W6YKD3_COCCA	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (749 aa)
	W6YKK7_COCCA	RRM domain-containing protein. (206 aa)
	W6YKP8_COCCA	SAP domain-containing protein. (662 aa)
	COCCADRAFT_948	RRM domain-containing protein. (561 aa)
	W6YL93_COCCA	Uncharacterized protein. (716 aa)
	W6YLF0_COCCA	Uncharacterized protein. (1118 aa)
	W6YMJ3_COCCA	RRM domain-containing protein. (164 aa)
	W6YNE9_COCCA	Uncharacterized protein. (1269 aa)
	W6YPE7_COCCA	Uncharacterized protein. (351 aa)
	W6YPT2_COCCA	Uncharacterized protein. (671 aa)
	W6YQ88_COCCA	Uncharacterized protein. (520 aa)
	W6YRX0_COCCA	RRM domain-containing protein. (553 aa)
	W6YV34_COCCA	RRM domain-containing protein. (821 aa)
	W6Z0T6_COCCA	RRM domain-containing protein. (333 aa)

Your Current Organism:

Bipolaris zeicola

NCBI taxonomy Id: 930089
Other names: B. zeicola 26-R-13, Bipolaris zeicola 26-R-13, Cochliobolus carbonum 26-R-13

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COCCADRAFT_948	W6YGP6_COCCA	W6YKY8	W6YGP6	RRM domain-containing protein.	Uncharacterized protein.	0.436
PRT1	TIF35	W6YJY8	W6YFX6	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.	0.999
PRT1	W6Y3B2_COCCA	W6YJY8	W6Y3B2	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	RRM domain-containing protein.	0.878
PRT1	W6YAK1_COCCA	W6YJY8	W6YAK1	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Uncharacterized protein.	0.554
PRT1	W6YKD3_COCCA	W6YJY8	W6YKD3	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.705
TIF35	PRT1	W6YFX6	W6YJY8	Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	0.999
TIF35	W6XWH7_COCCA	W6YFX6	W6XWH7	Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.	RRM domain-containing protein.	0.489
TIF35	W6XX65_COCCA	W6YFX6	W6XX65	Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.	Uncharacterized protein.	0.465
TIF35	W6Y3B2_COCCA	W6YFX6	W6Y3B2	Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.	RRM domain-containing protein.	0.813
TIF35	W6Y8R4_COCCA	W6YFX6	W6Y8R4	Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.	Uncharacterized protein.	0.476
TIF35	W6YKD3_COCCA	W6YFX6	W6YKD3	Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.408
TIF35	W6YKK7_COCCA	W6YFX6	W6YKK7	Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.	RRM domain-containing protein.	0.439
W6XPJ7_COCCA	W6XSB4_COCCA	W6XPJ7	W6XSB4	RRM domain-containing protein.	Uncharacterized protein.	0.488
W6XPJ7_COCCA	W6XW93_COCCA	W6XPJ7	W6XW93	RRM domain-containing protein.	Uncharacterized protein.	0.981
W6XPJ7_COCCA	W6Y6I4_COCCA	W6XPJ7	W6Y6I4	RRM domain-containing protein.	Uncharacterized protein.	0.578
W6XPJ7_COCCA	W6Y7F0_COCCA	W6XPJ7	W6Y7F0	RRM domain-containing protein.	Uncharacterized protein.	0.681
W6XPJ7_COCCA	W6Y8R4_COCCA	W6XPJ7	W6Y8R4	RRM domain-containing protein.	Uncharacterized protein.	0.470
W6XPJ7_COCCA	W6Y9X1_COCCA	W6XPJ7	W6Y9X1	RRM domain-containing protein.	RRM domain-containing protein.	0.642
W6XPJ7_COCCA	W6YFG6_COCCA	W6XPJ7	W6YFG6	RRM domain-containing protein.	Uncharacterized protein.	0.524
W6XPJ7_COCCA	W6YRX0_COCCA	W6XPJ7	W6YRX0	RRM domain-containing protein.	RRM domain-containing protein.	0.879