37 items (Bipolaris zeicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W6YKV7_COCCA	Uncharacterized protein. (843 aa)
	W6XPY4_COCCA	WD_REPEATS_REGION domain-containing protein. (1123 aa)
	W6XQD6_COCCA	Uncharacterized protein. (1667 aa)
	W6XR17_COCCA	Uncharacterized protein. (637 aa)
	W6XU82_COCCA	RanBD1 domain-containing protein. (566 aa)
	W6XV33_COCCA	Uncharacterized protein. (1207 aa)
	W6XVZ3_COCCA	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (575 aa)
	W6XZR6_COCCA	Uncharacterized protein. (211 aa)
	W6Y000_COCCA	Uncharacterized protein. (153 aa)
	W6Y0N1_COCCA	Uncharacterized protein. (753 aa)
	W6Y127_COCCA	WD_REPEATS_REGION domain-containing protein. (663 aa)
	W6Y2M7_COCCA	Uncharacterized protein. (557 aa)
	W6Y3M5_COCCA	Uncharacterized protein. (1478 aa)
	W6Y3Z7_COCCA	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1029 aa)
	W6Y5G2_COCCA	RRM domain-containing protein. (253 aa)
	W6Y6I8_COCCA	Nsp1_C domain-containing protein. (697 aa)
	W6Y720_COCCA	Nup188_C domain-containing protein. (1877 aa)
	W6Y9B7_COCCA	RRM domain-containing protein. (337 aa)
	W6YAF8_COCCA	Fip1 domain-containing protein. (253 aa)
	W6YAU2_COCCA	Uncharacterized protein. (1364 aa)
	W6YBL9_COCCA	WD_REPEATS_REGION domain-containing protein. (455 aa)
	W6YBV0_COCCA	Uncharacterized protein. (1125 aa)
	W6YC31_COCCA	Uncharacterized protein. (363 aa)
	W6YCR8_COCCA	Uncharacterized protein. (239 aa)
	W6YEK7_COCCA	RRM domain-containing protein. (158 aa)
	W6YEM1_COCCA	Uncharacterized protein. (591 aa)
	W6YG89_COCCA	Nup54 domain-containing protein. (415 aa)
	W6YHL5_COCCA	Uncharacterized protein. (284 aa)
	W6YIP1_COCCA	PWI domain-containing protein. (328 aa)
	W6YJJ2_COCCA	Uncharacterized protein. (1366 aa)
	COCCADRAFT_495	Slu7 domain-containing protein. (476 aa)
	W6YP12_COCCA	C3H1-type domain-containing protein. (618 aa)
	W6YPC5_COCCA	RanBD1 domain-containing protein. (251 aa)
	W6YPZ6_COCCA	Peptidase S59 domain-containing protein. (2007 aa)
	W6YRV6_COCCA	TPR_MLP1_2 domain-containing protein. (2222 aa)
	W6Z1A4_COCCA	TAP-C domain-containing protein. (316 aa)
	W6Z2T4_COCCA	Uncharacterized protein. (349 aa)

Your Current Organism:

Bipolaris zeicola

NCBI taxonomy Id: 930089
Other names: B. zeicola 26-R-13, Bipolaris zeicola 26-R-13, Cochliobolus carbonum 26-R-13

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COCCADRAFT_495	W6XVZ3_COCCA	W6YMP9	W6XVZ3	Slu7 domain-containing protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.908
COCCADRAFT_495	W6XZR6_COCCA	W6YMP9	W6XZR6	Slu7 domain-containing protein.	Uncharacterized protein.	0.775
COCCADRAFT_495	W6Y000_COCCA	W6YMP9	W6Y000	Slu7 domain-containing protein.	Uncharacterized protein.	0.768
COCCADRAFT_495	W6Y5G2_COCCA	W6YMP9	W6Y5G2	Slu7 domain-containing protein.	RRM domain-containing protein.	0.871
COCCADRAFT_495	W6YBL9_COCCA	W6YMP9	W6YBL9	Slu7 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.997
COCCADRAFT_495	W6YEK7_COCCA	W6YMP9	W6YEK7	Slu7 domain-containing protein.	RRM domain-containing protein.	0.939
COCCADRAFT_495	W6YIP1_COCCA	W6YMP9	W6YIP1	Slu7 domain-containing protein.	PWI domain-containing protein.	0.887
COCCADRAFT_495	W6Z2T4_COCCA	W6YMP9	W6Z2T4	Slu7 domain-containing protein.	Uncharacterized protein.	0.669
W6XQD6_COCCA	W6XR17_COCCA	W6XQD6	W6XR17	Uncharacterized protein.	Uncharacterized protein.	0.443
W6XQD6_COCCA	W6XU82_COCCA	W6XQD6	W6XU82	Uncharacterized protein.	RanBD1 domain-containing protein.	0.798
W6XQD6_COCCA	W6XV33_COCCA	W6XQD6	W6XV33	Uncharacterized protein.	Uncharacterized protein.	0.826
W6XQD6_COCCA	W6Y0N1_COCCA	W6XQD6	W6Y0N1	Uncharacterized protein.	Uncharacterized protein.	0.798
W6XQD6_COCCA	W6Y2M7_COCCA	W6XQD6	W6Y2M7	Uncharacterized protein.	Uncharacterized protein.	0.902
W6XQD6_COCCA	W6Y3M5_COCCA	W6XQD6	W6Y3M5	Uncharacterized protein.	Uncharacterized protein.	0.992
W6XQD6_COCCA	W6Y3Z7_COCCA	W6XQD6	W6Y3Z7	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.996
W6XQD6_COCCA	W6Y6I8_COCCA	W6XQD6	W6Y6I8	Uncharacterized protein.	Nsp1_C domain-containing protein.	0.966
W6XQD6_COCCA	W6Y720_COCCA	W6XQD6	W6Y720	Uncharacterized protein.	Nup188_C domain-containing protein.	0.981
W6XQD6_COCCA	W6Y9B7_COCCA	W6XQD6	W6Y9B7	Uncharacterized protein.	RRM domain-containing protein.	0.458
W6XQD6_COCCA	W6YAU2_COCCA	W6XQD6	W6YAU2	Uncharacterized protein.	Uncharacterized protein.	0.999
W6XQD6_COCCA	W6YBV0_COCCA	W6XQD6	W6YBV0	Uncharacterized protein.	Uncharacterized protein.	0.999