7 items (Bipolaris oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W6YPU6_COCMI	LNS2 domain-containing protein. (745 aa)
	W6YRQ7_COCMI	Uncharacterized protein. (672 aa)
	W6YYV7_COCMI	Uncharacterized protein. (865 aa)
	W6Z824_COCMI	FCP1 homology domain-containing protein. (467 aa)
	W6Z989_COCMI	Uncharacterized protein. (476 aa)
	W6ZE16_COCMI	Uncharacterized protein. (444 aa)
	W6ZM69_COCMI	Uncharacterized protein. (511 aa)

Your Current Organism:

Bipolaris oryzae

NCBI taxonomy Id: 930090
Other names: B. oryzae ATCC 44560, Bipolaris oryzae ATCC 44560, Cochliobolus miyabeanus ATCC 44560, Cochliobolus miyabeanus WK-1C

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W6YPU6_COCMI	W6YRQ7_COCMI	W6YPU6	W6YRQ7	LNS2 domain-containing protein.	Uncharacterized protein.	0.604
W6YPU6_COCMI	W6YYV7_COCMI	W6YPU6	W6YYV7	LNS2 domain-containing protein.	Uncharacterized protein.	0.900
W6YPU6_COCMI	W6Z824_COCMI	W6YPU6	W6Z824	LNS2 domain-containing protein.	FCP1 homology domain-containing protein.	0.977
W6YPU6_COCMI	W6Z989_COCMI	W6YPU6	W6Z989	LNS2 domain-containing protein.	Uncharacterized protein.	0.971
W6YPU6_COCMI	W6ZM69_COCMI	W6YPU6	W6ZM69	LNS2 domain-containing protein.	Uncharacterized protein.	0.767
W6YRQ7_COCMI	W6YPU6_COCMI	W6YRQ7	W6YPU6	Uncharacterized protein.	LNS2 domain-containing protein.	0.604
W6YRQ7_COCMI	W6Z824_COCMI	W6YRQ7	W6Z824	Uncharacterized protein.	FCP1 homology domain-containing protein.	0.802
W6YYV7_COCMI	W6YPU6_COCMI	W6YYV7	W6YPU6	Uncharacterized protein.	LNS2 domain-containing protein.	0.900
W6YYV7_COCMI	W6Z989_COCMI	W6YYV7	W6Z989	Uncharacterized protein.	Uncharacterized protein.	0.908
W6Z824_COCMI	W6YPU6_COCMI	W6Z824	W6YPU6	FCP1 homology domain-containing protein.	LNS2 domain-containing protein.	0.977
W6Z824_COCMI	W6YRQ7_COCMI	W6Z824	W6YRQ7	FCP1 homology domain-containing protein.	Uncharacterized protein.	0.802
W6Z824_COCMI	W6ZM69_COCMI	W6Z824	W6ZM69	FCP1 homology domain-containing protein.	Uncharacterized protein.	0.930
W6Z989_COCMI	W6YPU6_COCMI	W6Z989	W6YPU6	Uncharacterized protein.	LNS2 domain-containing protein.	0.971
W6Z989_COCMI	W6YYV7_COCMI	W6Z989	W6YYV7	Uncharacterized protein.	Uncharacterized protein.	0.908
W6Z989_COCMI	W6ZE16_COCMI	W6Z989	W6ZE16	Uncharacterized protein.	Uncharacterized protein.	0.948
W6ZE16_COCMI	W6Z989_COCMI	W6ZE16	W6Z989	Uncharacterized protein.	Uncharacterized protein.	0.948
W6ZM69_COCMI	W6YPU6_COCMI	W6ZM69	W6YPU6	Uncharacterized protein.	LNS2 domain-containing protein.	0.767
W6ZM69_COCMI	W6Z824_COCMI	W6ZM69	W6Z824	Uncharacterized protein.	FCP1 homology domain-containing protein.	0.930