(32 nodes) Cytosolic ribosome network (Bipolaris oryzae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W6YQJ2_COCMI	Uncharacterized protein. (125 aa)
	W6YR91_COCMI	Ribosomal_S10 domain-containing protein. (116 aa)
	W6YSK7_COCMI	Uncharacterized protein. (108 aa)
	W6YTP4_COCMI	Uncharacterized protein. (146 aa)
	W6YYD4_COCMI	KOW domain-containing protein. (135 aa)
	W6YYK5_COCMI	Uncharacterized protein. (159 aa)
	W6Z5R2_COCMI	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (141 aa)
	W6Z5W0_COCMI	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (142 aa)
	W6Z5Y5_COCMI	Uncharacterized protein. (114 aa)
	W6Z674_COCMI	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (155 aa)
	W6Z7C8_COCMI	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	W6Z7L1_COCMI	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family. (190 aa)
	W6Z829_COCMI	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (145 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (299 aa)
	W6ZBR8_COCMI	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (215 aa)
	W6ZCD0_COCMI	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	W6ZCX8_COCMI	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family. (179 aa)
	W6ZEK2_COCMI	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	W6ZIN1_COCMI	Uncharacterized protein. (51 aa)
	W6ZJT2_COCMI	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (196 aa)
	W6ZJW7_COCMI	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (87 aa)
	W6ZLV2_COCMI	Ribosomal_L14e domain-containing protein. (553 aa)
	W6ZML2_COCMI	Ribosomal_L16 domain-containing protein. (221 aa)
	W6ZPC7_COCMI	Uncharacterized protein. (202 aa)
	W6ZPU2_COCMI	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (208 aa)
	W6ZSJ0_COCMI	Ribosomal_L2_C domain-containing protein. (254 aa)
	W6ZT07_COCMI	Uncharacterized protein. (129 aa)
	W6ZTN1_COCMI	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (260 aa)
	W6ZW52_COCMI	Ribosomal protein L37; Binds to the 23S rRNA. (94 aa)
	W6ZW92_COCMI	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (262 aa)
	W7A1T2_COCMI	DCUN1 domain-containing protein. (639 aa)
	W7A5C9_COCMI	Ribosomal_L7Ae domain-containing protein. (110 aa)

Your Current Organism:

Bipolaris oryzae

NCBI taxonomy Id: 930090
Other names: B. oryzae ATCC 44560, Bipolaris oryzae ATCC 44560, Cochliobolus miyabeanus ATCC 44560, Cochliobolus miyabeanus WK-1C

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPS0	W6YQJ2_COCMI	W6Z8Z2	W6YQJ2	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein.	0.999
RPS0	W6YR91_COCMI	W6Z8Z2	W6YR91	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Ribosomal_S10 domain-containing protein.	0.999
RPS0	W6YSK7_COCMI	W6Z8Z2	W6YSK7	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein.	0.999
RPS0	W6YTP4_COCMI	W6Z8Z2	W6YTP4	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein.	0.999
RPS0	W6YYD4_COCMI	W6Z8Z2	W6YYD4	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	KOW domain-containing protein.	0.999
RPS0	W6YYK5_COCMI	W6Z8Z2	W6YYK5	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein.	0.999
RPS0	W6Z5R2_COCMI	W6Z8Z2	W6Z5R2	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.999
RPS0	W6Z5W0_COCMI	W6Z8Z2	W6Z5W0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
RPS0	W6Z5Y5_COCMI	W6Z8Z2	W6Z5Y5	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein.	0.999
RPS0	W6Z674_COCMI	W6Z8Z2	W6Z674	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	0.999
RPS0	W6Z7C8_COCMI	W6Z8Z2	W6Z7C8	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	0.999
RPS0	W6Z7L1_COCMI	W6Z8Z2	W6Z7L1	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
RPS0	W6Z829_COCMI	W6Z8Z2	W6Z829	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.999
RPS0	W6ZBR8_COCMI	W6Z8Z2	W6ZBR8	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.999
RPS0	W6ZCD0_COCMI	W6Z8Z2	W6ZCD0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.999
RPS0	W6ZCX8_COCMI	W6Z8Z2	W6ZCX8	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	0.999
RPS0	W6ZEK2_COCMI	W6Z8Z2	W6ZEK2	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	0.999
RPS0	W6ZIN1_COCMI	W6Z8Z2	W6ZIN1	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein.	0.998
RPS0	W6ZJT2_COCMI	W6Z8Z2	W6ZJT2	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
RPS0	W6ZJW7_COCMI	W6Z8Z2	W6ZJW7	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	0.999