17 items (Bipolaris oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W6YNK3_COCMI	Uncharacterized protein. (1265 aa)
	W6YT59_COCMI	Uncharacterized protein. (151 aa)
	W6YXU1_COCMI	Uncharacterized protein. (279 aa)
	W6YZ51_COCMI	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (282 aa)
	W6YZP9_COCMI	Uncharacterized protein. (266 aa)
	SEY1	Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily. (884 aa)
	W6Z1X9_COCMI	Ima1_N domain-containing protein. (581 aa)
	W6Z4X5_COCMI	Uncharacterized protein. (883 aa)
	W6Z5V3_COCMI	Csm1 domain-containing protein. (513 aa)
	W6Z763_COCMI	Uncharacterized protein. (402 aa)
	W6ZBR4_COCMI	Zinc_ribbon_10 domain-containing protein. (396 aa)
	W6ZEM7_COCMI	Brr6_like_C_C domain-containing protein. (529 aa)
	COCMIDRAFT_575	SUN domain-containing protein. (762 aa)
	W6ZKJ4_COCMI	HTH APSES-type domain-containing protein. (436 aa)
	W6ZMY7_COCMI	Uncharacterized protein. (637 aa)
	W6ZNI3_COCMI	Protein YOP1. (171 aa)
	W6ZPY2_COCMI	Uncharacterized protein. (374 aa)

Your Current Organism:

Bipolaris oryzae

NCBI taxonomy Id: 930090
Other names: B. oryzae ATCC 44560, Bipolaris oryzae ATCC 44560, Cochliobolus miyabeanus ATCC 44560, Cochliobolus miyabeanus WK-1C

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COCMIDRAFT_575	W6YT59_COCMI	W6ZFY4	W6YT59	SUN domain-containing protein.	Uncharacterized protein.	0.548
COCMIDRAFT_575	W6YZ51_COCMI	W6ZFY4	W6YZ51	SUN domain-containing protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.659
COCMIDRAFT_575	W6Z1X9_COCMI	W6ZFY4	W6Z1X9	SUN domain-containing protein.	Ima1_N domain-containing protein.	0.672
COCMIDRAFT_575	W6Z763_COCMI	W6ZFY4	W6Z763	SUN domain-containing protein.	Uncharacterized protein.	0.723
COCMIDRAFT_575	W6ZKJ4_COCMI	W6ZFY4	W6ZKJ4	SUN domain-containing protein.	HTH APSES-type domain-containing protein.	0.823
COCMIDRAFT_575	W6ZMY7_COCMI	W6ZFY4	W6ZMY7	SUN domain-containing protein.	Uncharacterized protein.	0.597
SEY1	W6YXU1_COCMI	W6Z1Q7	W6YXU1	Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.	Uncharacterized protein.	0.521
SEY1	W6ZBR4_COCMI	W6Z1Q7	W6ZBR4	Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.	Zinc_ribbon_10 domain-containing protein.	0.592
SEY1	W6ZNI3_COCMI	W6Z1Q7	W6ZNI3	Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.	Protein YOP1.	0.850
W6YNK3_COCMI	W6YXU1_COCMI	W6YNK3	W6YXU1	Uncharacterized protein.	Uncharacterized protein.	0.490
W6YNK3_COCMI	W6YZP9_COCMI	W6YNK3	W6YZP9	Uncharacterized protein.	Uncharacterized protein.	0.495
W6YNK3_COCMI	W6Z4X5_COCMI	W6YNK3	W6Z4X5	Uncharacterized protein.	Uncharacterized protein.	0.495
W6YNK3_COCMI	W6ZEM7_COCMI	W6YNK3	W6ZEM7	Uncharacterized protein.	Brr6_like_C_C domain-containing protein.	0.442
W6YNK3_COCMI	W6ZMY7_COCMI	W6YNK3	W6ZMY7	Uncharacterized protein.	Uncharacterized protein.	0.750
W6YT59_COCMI	COCMIDRAFT_575	W6YT59	W6ZFY4	Uncharacterized protein.	SUN domain-containing protein.	0.548
W6YT59_COCMI	W6YZ51_COCMI	W6YT59	W6YZ51	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.500
W6YT59_COCMI	W6ZKJ4_COCMI	W6YT59	W6ZKJ4	Uncharacterized protein.	HTH APSES-type domain-containing protein.	0.500
W6YXU1_COCMI	SEY1	W6YXU1	W6Z1Q7	Uncharacterized protein.	Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.	0.521
W6YXU1_COCMI	W6YNK3_COCMI	W6YXU1	W6YNK3	Uncharacterized protein.	Uncharacterized protein.	0.490
W6YZ51_COCMI	COCMIDRAFT_575	W6YZ51	W6ZFY4	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	SUN domain-containing protein.	0.659