26 items (Bipolaris oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W6ZLY6_COCMI	Uncharacterized protein. (684 aa)
	COCMIDRAFT_523	SF3b1 domain-containing protein. (1187 aa)
	W6ZKP2_COCMI	WD_REPEATS_REGION domain-containing protein. (455 aa)
	W6ZJN1_COCMI	Uncharacterized protein. (361 aa)
	W6ZIW8_COCMI	Protein kinase domain-containing protein. (627 aa)
	W6ZI46_COCMI	RRM domain-containing protein. (322 aa)
	W6ZFU2_COCMI	Uncharacterized protein. (1274 aa)
	W6ZDZ5_COCMI	Protein kinase domain-containing protein. (390 aa)
	W6Z994_COCMI	NmrA domain-containing protein. (294 aa)
	W6Z8M6_COCMI	PSP domain-containing protein. (569 aa)
	W6Z721_COCMI	Uncharacterized protein. (1062 aa)
	W6Z2P4_COCMI	Matrin-type domain-containing protein. (235 aa)
	W6YZZ8_COCMI	NAD(P)-bd_dom domain-containing protein. (314 aa)
	W6YZR2_COCMI	Suf domain-containing protein. (564 aa)
	W6YY62_COCMI	Uncharacterized protein. (292 aa)
	W6YXF7_COCMI	Uncharacterized protein. (545 aa)
	W6YVK2_COCMI	GST N-terminal domain-containing protein. (253 aa)
	W6ZMT0_COCMI	F-box domain-containing protein. (644 aa)
	W6ZXM6_COCMI	Uncharacterized protein. (723 aa)
	W6ZTC2_COCMI	Uncharacterized protein. (556 aa)
	W6ZP49_COCMI	MPN domain-containing protein. (2328 aa)
	W6YTJ1_COCMI	Uncharacterized protein. (1673 aa)
	W6YS54_COCMI	Uncharacterized protein. (760 aa)
	W6ZNX3_COCMI	Matrin-type domain-containing protein. (57 aa)
	W6ZNP9_COCMI	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (575 aa)
	W6ZMT3_COCMI	Uncharacterized protein. (108 aa)

Your Current Organism:

Bipolaris oryzae

NCBI taxonomy Id: 930090
Other names: B. oryzae ATCC 44560, Bipolaris oryzae ATCC 44560, Cochliobolus miyabeanus ATCC 44560, Cochliobolus miyabeanus WK-1C

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COCMIDRAFT_523	W6YTJ1_COCMI	W6ZLX9	W6YTJ1	SF3b1 domain-containing protein.	Uncharacterized protein.	0.746
COCMIDRAFT_523	W6YXF7_COCMI	W6ZLX9	W6YXF7	SF3b1 domain-containing protein.	Uncharacterized protein.	0.669
COCMIDRAFT_523	W6YY62_COCMI	W6ZLX9	W6YY62	SF3b1 domain-containing protein.	Uncharacterized protein.	0.869
COCMIDRAFT_523	W6YZR2_COCMI	W6ZLX9	W6YZR2	SF3b1 domain-containing protein.	Suf domain-containing protein.	0.854
COCMIDRAFT_523	W6Z2P4_COCMI	W6ZLX9	W6Z2P4	SF3b1 domain-containing protein.	Matrin-type domain-containing protein.	0.997
COCMIDRAFT_523	W6Z721_COCMI	W6ZLX9	W6Z721	SF3b1 domain-containing protein.	Uncharacterized protein.	0.998
COCMIDRAFT_523	W6Z8M6_COCMI	W6ZLX9	W6Z8M6	SF3b1 domain-containing protein.	PSP domain-containing protein.	0.999
COCMIDRAFT_523	W6ZI46_COCMI	W6ZLX9	W6ZI46	SF3b1 domain-containing protein.	RRM domain-containing protein.	0.994
COCMIDRAFT_523	W6ZKP2_COCMI	W6ZLX9	W6ZKP2	SF3b1 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.934
COCMIDRAFT_523	W6ZLY6_COCMI	W6ZLX9	W6ZLY6	SF3b1 domain-containing protein.	Uncharacterized protein.	0.993
COCMIDRAFT_523	W6ZMT3_COCMI	W6ZLX9	W6ZMT3	SF3b1 domain-containing protein.	Uncharacterized protein.	0.999
COCMIDRAFT_523	W6ZNP9_COCMI	W6ZLX9	W6ZNP9	SF3b1 domain-containing protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.996
COCMIDRAFT_523	W6ZNX3_COCMI	W6ZLX9	W6ZNX3	SF3b1 domain-containing protein.	Matrin-type domain-containing protein.	0.987
COCMIDRAFT_523	W6ZP49_COCMI	W6ZLX9	W6ZP49	SF3b1 domain-containing protein.	MPN domain-containing protein.	0.987
COCMIDRAFT_523	W6ZXM6_COCMI	W6ZLX9	W6ZXM6	SF3b1 domain-containing protein.	Uncharacterized protein.	0.826
W6YS54_COCMI	W6ZNP9_COCMI	W6YS54	W6ZNP9	Uncharacterized protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.442
W6YTJ1_COCMI	COCMIDRAFT_523	W6YTJ1	W6ZLX9	Uncharacterized protein.	SF3b1 domain-containing protein.	0.746
W6YTJ1_COCMI	W6YZR2_COCMI	W6YTJ1	W6YZR2	Uncharacterized protein.	Suf domain-containing protein.	0.789
W6YTJ1_COCMI	W6Z2P4_COCMI	W6YTJ1	W6Z2P4	Uncharacterized protein.	Matrin-type domain-containing protein.	0.411
W6YTJ1_COCMI	W6Z721_COCMI	W6YTJ1	W6Z721	Uncharacterized protein.	Uncharacterized protein.	0.654