19 items (Bipolaris oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W6ZCQ2_COCMI	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (130 aa)
	W6ZD45_COCMI	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (917 aa)
	W6ZIS2_COCMI	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic. (270 aa)
	W6ZKE0_COCMI	L-type lectin-like domain-containing protein. (455 aa)
	W6ZL11_COCMI	EF-hand domain-containing protein. (208 aa)
	VMA21	Vacuolar ATPase assembly integral membrane protein VMA21; Required for the assembly of the V0 complex of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum; Belongs to the VMA21 family. (107 aa)
	W6ZZC1_COCMI	Uncharacterized protein. (261 aa)
	W6YRB6_COCMI	L-type lectin-like domain-containing protein. (322 aa)
	W6YTZ5_COCMI	Trafficking protein particle complex subunit BET3. (192 aa)
	W6YWE9_COCMI	GOLD domain-containing protein. (203 aa)
	W6YYE0_COCMI	TPT domain-containing protein. (602 aa)
	W6YYR9_COCMI	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (179 aa)
	W6YYZ0_COCMI	Uncharacterized protein. (304 aa)
	W6Z099_COCMI	Uncharacterized protein. (272 aa)
	W6Z3A8_COCMI	Uncharacterized protein. (187 aa)
	W6Z422_COCMI	GOLD domain-containing protein. (219 aa)
	W6Z9T7_COCMI	Glucosamine 6-phosphate N-acetyltransferase; Belongs to the acetyltransferase family. GNA1 subfamily. (164 aa)
	W6ZB12_COCMI	Uncharacterized protein. (391 aa)
	W6ZC41_COCMI	TPR_REGION domain-containing protein. (428 aa)

Your Current Organism:

Bipolaris oryzae

NCBI taxonomy Id: 930090
Other names: B. oryzae ATCC 44560, Bipolaris oryzae ATCC 44560, Cochliobolus miyabeanus ATCC 44560, Cochliobolus miyabeanus WK-1C

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W6YRB6_COCMI	W6YWE9_COCMI	W6YRB6	W6YWE9	L-type lectin-like domain-containing protein.	GOLD domain-containing protein.	0.700
W6YRB6_COCMI	W6YYZ0_COCMI	W6YRB6	W6YYZ0	L-type lectin-like domain-containing protein.	Uncharacterized protein.	0.408
W6YRB6_COCMI	W6Z422_COCMI	W6YRB6	W6Z422	L-type lectin-like domain-containing protein.	GOLD domain-containing protein.	0.699
W6YRB6_COCMI	W6ZKE0_COCMI	W6YRB6	W6ZKE0	L-type lectin-like domain-containing protein.	L-type lectin-like domain-containing protein.	0.795
W6YTZ5_COCMI	W6YWE9_COCMI	W6YTZ5	W6YWE9	Trafficking protein particle complex subunit BET3.	GOLD domain-containing protein.	0.418
W6YTZ5_COCMI	W6YYR9_COCMI	W6YTZ5	W6YYR9	Trafficking protein particle complex subunit BET3.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.999
W6YTZ5_COCMI	W6Z3A8_COCMI	W6YTZ5	W6Z3A8	Trafficking protein particle complex subunit BET3.	Uncharacterized protein.	0.999
W6YTZ5_COCMI	W6ZC41_COCMI	W6YTZ5	W6ZC41	Trafficking protein particle complex subunit BET3.	TPR_REGION domain-containing protein.	0.976
W6YTZ5_COCMI	W6ZCQ2_COCMI	W6YTZ5	W6ZCQ2	Trafficking protein particle complex subunit BET3.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.999
W6YTZ5_COCMI	W6ZIS2_COCMI	W6YTZ5	W6ZIS2	Trafficking protein particle complex subunit BET3.	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	0.999
W6YTZ5_COCMI	W6ZZC1_COCMI	W6YTZ5	W6ZZC1	Trafficking protein particle complex subunit BET3.	Uncharacterized protein.	0.991
W6YWE9_COCMI	W6YRB6_COCMI	W6YWE9	W6YRB6	GOLD domain-containing protein.	L-type lectin-like domain-containing protein.	0.700
W6YWE9_COCMI	W6YTZ5_COCMI	W6YWE9	W6YTZ5	GOLD domain-containing protein.	Trafficking protein particle complex subunit BET3.	0.418
W6YWE9_COCMI	W6YYZ0_COCMI	W6YWE9	W6YYZ0	GOLD domain-containing protein.	Uncharacterized protein.	0.872
W6YWE9_COCMI	W6Z422_COCMI	W6YWE9	W6Z422	GOLD domain-containing protein.	GOLD domain-containing protein.	0.999
W6YWE9_COCMI	W6ZB12_COCMI	W6YWE9	W6ZB12	GOLD domain-containing protein.	Uncharacterized protein.	0.766
W6YWE9_COCMI	W6ZD45_COCMI	W6YWE9	W6ZD45	GOLD domain-containing protein.	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.831
W6YWE9_COCMI	W6ZKE0_COCMI	W6YWE9	W6ZKE0	GOLD domain-containing protein.	L-type lectin-like domain-containing protein.	0.795
W6YYR9_COCMI	W6YTZ5_COCMI	W6YYR9	W6YTZ5	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Trafficking protein particle complex subunit BET3.	0.999
W6YYR9_COCMI	W6Z3A8_COCMI	W6YYR9	W6Z3A8	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Uncharacterized protein.	0.998