31 items (Bipolaris oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W6Z2W7_COCMI	GFA domain-containing protein. (153 aa)
	W6Z2E1_COCMI	Uncharacterized protein; Belongs to the synaptobrevin family. (215 aa)
	W6Z099_COCMI	Uncharacterized protein. (272 aa)
	W6YZ01_COCMI	t-SNARE coiled-coil homology domain-containing protein. (198 aa)
	W6ZC80_COCMI	Uncharacterized protein. (1022 aa)
	W6ZCI6_COCMI	Uncharacterized protein. (437 aa)
	W6ZDC9_COCMI	Uncharacterized protein. (987 aa)
	W6ZDI2_COCMI	Uncharacterized protein. (138 aa)
	W6ZFQ3_COCMI	Uncharacterized protein. (1285 aa)
	W6ZGW0_COCMI	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. (188 aa)
	W6ZIN9_COCMI	Uncharacterized protein. (1024 aa)
	W6ZJP4_COCMI	Uncharacterized protein. (805 aa)
	W6ZKE0_COCMI	L-type lectin-like domain-containing protein. (455 aa)
	W6ZL66_COCMI	t-SNARE coiled-coil homology domain-containing protein. (226 aa)
	W6ZMR2_COCMI	Uncharacterized protein. (394 aa)
	W6ZMU4_COCMI	Uncharacterized protein. (884 aa)
	W6ZRY3_COCMI	Uncharacterized protein. (139 aa)
	W6ZTR3_COCMI	Uncharacterized protein. (85 aa)
	VMA21	Vacuolar ATPase assembly integral membrane protein VMA21; Required for the assembly of the V0 complex of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum; Belongs to the VMA21 family. (107 aa)
	W6ZWR2_COCMI	WD_REPEATS_REGION domain-containing protein. (1247 aa)
	W6Z9U4_COCMI	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (189 aa)
	W6YWM7_COCMI	Uncharacterized protein. (247 aa)
	W6YWE9_COCMI	GOLD domain-containing protein. (203 aa)
	W6YRB6_COCMI	L-type lectin-like domain-containing protein. (322 aa)
	W6YPG0_COCMI	Uncharacterized protein. (771 aa)
	W6YYZ0_COCMI	Uncharacterized protein. (304 aa)
	W6Z605_COCMI	Uncharacterized protein. (294 aa)
	W6Z514_COCMI	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (775 aa)
	W6Z4E5_COCMI	Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex. (252 aa)
	W6Z422_COCMI	GOLD domain-containing protein. (219 aa)
	W6Z3P2_COCMI	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (298 aa)

Your Current Organism:

Bipolaris oryzae

NCBI taxonomy Id: 930090
Other names: B. oryzae ATCC 44560, Bipolaris oryzae ATCC 44560, Cochliobolus miyabeanus ATCC 44560, Cochliobolus miyabeanus WK-1C

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W6YPG0_COCMI	W6YRB6_COCMI	W6YPG0	W6YRB6	Uncharacterized protein.	L-type lectin-like domain-containing protein.	0.608
W6YPG0_COCMI	W6YWE9_COCMI	W6YPG0	W6YWE9	Uncharacterized protein.	GOLD domain-containing protein.	0.713
W6YPG0_COCMI	W6YZ01_COCMI	W6YPG0	W6YZ01	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.538
W6YPG0_COCMI	W6Z2E1_COCMI	W6YPG0	W6Z2E1	Uncharacterized protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.733
W6YPG0_COCMI	W6Z2W7_COCMI	W6YPG0	W6Z2W7	Uncharacterized protein.	GFA domain-containing protein.	0.828
W6YPG0_COCMI	W6Z3P2_COCMI	W6YPG0	W6Z3P2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.803
W6YPG0_COCMI	W6Z422_COCMI	W6YPG0	W6Z422	Uncharacterized protein.	GOLD domain-containing protein.	0.684
W6YPG0_COCMI	W6Z4E5_COCMI	W6YPG0	W6Z4E5	Uncharacterized protein.	Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.	0.646
W6YPG0_COCMI	W6Z514_COCMI	W6YPG0	W6Z514	Uncharacterized protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.953
W6YPG0_COCMI	W6ZDC9_COCMI	W6YPG0	W6ZDC9	Uncharacterized protein.	Uncharacterized protein.	0.518
W6YPG0_COCMI	W6ZDI2_COCMI	W6YPG0	W6ZDI2	Uncharacterized protein.	Uncharacterized protein.	0.639
W6YPG0_COCMI	W6ZIN9_COCMI	W6YPG0	W6ZIN9	Uncharacterized protein.	Uncharacterized protein.	0.758
W6YPG0_COCMI	W6ZJP4_COCMI	W6YPG0	W6ZJP4	Uncharacterized protein.	Uncharacterized protein.	0.518
W6YPG0_COCMI	W6ZKE0_COCMI	W6YPG0	W6ZKE0	Uncharacterized protein.	L-type lectin-like domain-containing protein.	0.678
W6YPG0_COCMI	W6ZMU4_COCMI	W6YPG0	W6ZMU4	Uncharacterized protein.	Uncharacterized protein.	0.911
W6YPG0_COCMI	W6ZWR2_COCMI	W6YPG0	W6ZWR2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.940
W6YRB6_COCMI	W6YPG0_COCMI	W6YRB6	W6YPG0	L-type lectin-like domain-containing protein.	Uncharacterized protein.	0.608
W6YRB6_COCMI	W6YWE9_COCMI	W6YRB6	W6YWE9	L-type lectin-like domain-containing protein.	GOLD domain-containing protein.	0.700
W6YRB6_COCMI	W6YYZ0_COCMI	W6YRB6	W6YYZ0	L-type lectin-like domain-containing protein.	Uncharacterized protein.	0.408
W6YRB6_COCMI	W6YZ01_COCMI	W6YRB6	W6YZ01	L-type lectin-like domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.719