25 items (Bipolaris oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W6ZI97_COCMI	MPN domain-containing protein. (539 aa)
	W6ZII2_COCMI	Uncharacterized protein. (647 aa)
	W6ZJU8_COCMI	Uncharacterized protein. (127 aa)
	W6ZL07_COCMI	Uncharacterized protein. (523 aa)
	W6ZL22_COCMI	GLUE N-terminal domain-containing protein. (594 aa)
	W6ZQ69_COCMI	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (235 aa)
	W6ZRL2_COCMI	Uncharacterized protein; Belongs to the AAA ATPase family. (437 aa)
	W6ZU21_COCMI	Uncharacterized protein. (899 aa)
	W7A2U1_COCMI	Uncharacterized protein. (197 aa)
	W6YVW5_COCMI	Uncharacterized protein. (314 aa)
	W6YU68_COCMI	Uncharacterized protein. (225 aa)
	W6ZEX9_COCMI	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. (754 aa)
	W6ZAK5_COCMI	E3 ubiquitin-protein ligase. (820 aa)
	W6Z8W0_COCMI	Uncharacterized protein. (227 aa)
	W6Z7H4_COCMI	Sld7_C domain-containing protein. (496 aa)
	W6Z2D3_COCMI	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (274 aa)
	W6Z264_COCMI	Uncharacterized protein. (213 aa)
	W6Z1Y8_COCMI	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (859 aa)
	W6Z1N4_COCMI	Uncharacterized protein. (174 aa)
	W6ZFD4_COCMI	Uncharacterized protein. (422 aa)
	W6Z1G1_COCMI	Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. (297 aa)
	W6YXE4_COCMI	Uncharacterized protein. (627 aa)
	W6YWH9_COCMI	Uncharacterized protein. (212 aa)
	W6ZFI7_COCMI	Uncharacterized protein. (255 aa)
	W6ZGI0_COCMI	Uncharacterized protein. (214 aa)

Your Current Organism:

Bipolaris oryzae

NCBI taxonomy Id: 930090
Other names: B. oryzae ATCC 44560, Bipolaris oryzae ATCC 44560, Cochliobolus miyabeanus ATCC 44560, Cochliobolus miyabeanus WK-1C

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W6YU68_COCMI	W6YVW5_COCMI	W6YU68	W6YVW5	Uncharacterized protein.	Uncharacterized protein.	0.978
W6YU68_COCMI	W6YWH9_COCMI	W6YU68	W6YWH9	Uncharacterized protein.	Uncharacterized protein.	0.936
W6YU68_COCMI	W6YXE4_COCMI	W6YU68	W6YXE4	Uncharacterized protein.	Uncharacterized protein.	0.497
W6YU68_COCMI	W6Z264_COCMI	W6YU68	W6Z264	Uncharacterized protein.	Uncharacterized protein.	0.994
W6YU68_COCMI	W6Z2D3_COCMI	W6YU68	W6Z2D3	Uncharacterized protein.	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	0.962
W6YU68_COCMI	W6Z8W0_COCMI	W6YU68	W6Z8W0	Uncharacterized protein.	Uncharacterized protein.	0.998
W6YU68_COCMI	W6ZEX9_COCMI	W6YU68	W6ZEX9	Uncharacterized protein.	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.	0.676
W6YU68_COCMI	W6ZFD4_COCMI	W6YU68	W6ZFD4	Uncharacterized protein.	Uncharacterized protein.	0.918
W6YU68_COCMI	W6ZGI0_COCMI	W6YU68	W6ZGI0	Uncharacterized protein.	Uncharacterized protein.	0.978
W6YU68_COCMI	W6ZL07_COCMI	W6YU68	W6ZL07	Uncharacterized protein.	Uncharacterized protein.	0.994
W6YU68_COCMI	W6ZL22_COCMI	W6YU68	W6ZL22	Uncharacterized protein.	GLUE N-terminal domain-containing protein.	0.936
W6YU68_COCMI	W6ZQ69_COCMI	W6YU68	W6ZQ69	Uncharacterized protein.	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.899
W6YU68_COCMI	W6ZRL2_COCMI	W6YU68	W6ZRL2	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.997
W6YU68_COCMI	W7A2U1_COCMI	W6YU68	W7A2U1	Uncharacterized protein.	Uncharacterized protein.	0.960
W6YVW5_COCMI	W6YU68_COCMI	W6YVW5	W6YU68	Uncharacterized protein.	Uncharacterized protein.	0.978
W6YVW5_COCMI	W6YWH9_COCMI	W6YVW5	W6YWH9	Uncharacterized protein.	Uncharacterized protein.	0.622
W6YVW5_COCMI	W6YXE4_COCMI	W6YVW5	W6YXE4	Uncharacterized protein.	Uncharacterized protein.	0.482
W6YVW5_COCMI	W6Z264_COCMI	W6YVW5	W6Z264	Uncharacterized protein.	Uncharacterized protein.	0.934
W6YVW5_COCMI	W6Z8W0_COCMI	W6YVW5	W6Z8W0	Uncharacterized protein.	Uncharacterized protein.	0.954
W6YVW5_COCMI	W6ZEX9_COCMI	W6YVW5	W6ZEX9	Uncharacterized protein.	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.	0.511