46 items (Bipolaris oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	COCMIDRAFT_85	Uncharacterized protein. (815 aa)
	W6ZI07_COCMI	Uncharacterized protein. (248 aa)
	W6ZJ38_COCMI	DUF202 domain-containing protein. (130 aa)
	W6ZJK8_COCMI	t-SNARE coiled-coil homology domain-containing protein. (269 aa)
	W6ZJZ6_COCMI	CNH domain-containing protein. (1072 aa)
	W6ZKL2_COCMI	ANK_REP_REGION domain-containing protein. (108 aa)
	W6ZL66_COCMI	t-SNARE coiled-coil homology domain-containing protein. (226 aa)
	W6ZLP3_COCMI	Vps8 domain-containing protein. (1603 aa)
	W6ZMH7_COCMI	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (659 aa)
	W6ZPH2_COCMI	CNH domain-containing protein. (1322 aa)
	W6ZSY0_COCMI	t-SNARE coiled-coil homology domain-containing protein. (242 aa)
	W6ZTK9_COCMI	t-SNARE coiled-coil homology domain-containing protein. (308 aa)
	W6ZUA1_COCMI	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology. (839 aa)
	W6ZVX3_COCMI	SPX domain-containing protein. (790 aa)
	W7A516_COCMI	t-SNARE coiled-coil homology domain-containing protein. (369 aa)
	W6YQ75_COCMI	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (933 aa)
	W6YQU2_COCMI	Inhibitor I9 domain-containing protein. (70 aa)
	W6YRQ1_COCMI	Uncharacterized protein. (383 aa)
	W6YS28_COCMI	FYVE-type domain-containing protein. (659 aa)
	W6YWN4_COCMI	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (224 aa)
	W6YXX6_COCMI	Uncharacterized protein. (156 aa)
	W6YXY9_COCMI	Uncharacterized protein. (527 aa)
	W6YZ01_COCMI	t-SNARE coiled-coil homology domain-containing protein. (198 aa)
	W6YZM1_COCMI	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (388 aa)
	W6YZU4_COCMI	Uncharacterized protein. (221 aa)
	W6Z172_COCMI	Uncharacterized protein. (645 aa)
	W6Z2E1_COCMI	Uncharacterized protein; Belongs to the synaptobrevin family. (215 aa)
	W6Z352_COCMI	SPX domain-containing protein. (1513 aa)
	W6Z4E5_COCMI	Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex. (252 aa)
	W6Z4I2_COCMI	Uncharacterized protein; Belongs to the heat shock protein 70 family. (675 aa)
	W6Z4N4_COCMI	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (272 aa)
	W6Z5N3_COCMI	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (818 aa)
	W6Z605_COCMI	Uncharacterized protein. (294 aa)
	W6Z6G9_COCMI	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (593 aa)
	W6Z6X1_COCMI	Uncharacterized protein. (98 aa)
	W6Z7B2_COCMI	PH domain-containing protein. (1000 aa)
	W6Z7J7_COCMI	t-SNARE coiled-coil homology domain-containing protein. (424 aa)
	W6Z8M5_COCMI	t-SNARE coiled-coil homology domain-containing protein. (344 aa)
	W6ZAP6_COCMI	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (1714 aa)
	W6ZC80_COCMI	Uncharacterized protein. (1022 aa)
	W6ZCT2_COCMI	Pep3_Vps18 domain-containing protein. (969 aa)
	W6ZDE3_COCMI	CS domain-containing protein. (190 aa)
	W6ZDL8_COCMI	E3 ubiquitin-protein ligase PEP5. (977 aa)
	W6ZF56_COCMI	V-SNARE coiled-coil homology domain-containing protein. (122 aa)
	W6ZFQ3_COCMI	Uncharacterized protein. (1285 aa)
	W6ZFT3_COCMI	Uncharacterized protein. (1325 aa)

Your Current Organism:

Bipolaris oryzae

NCBI taxonomy Id: 930090
Other names: B. oryzae ATCC 44560, Bipolaris oryzae ATCC 44560, Cochliobolus miyabeanus ATCC 44560, Cochliobolus miyabeanus WK-1C

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COCMIDRAFT_85	W6YWN4_COCMI	W6ZHF0	W6YWN4	Uncharacterized protein.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.844
COCMIDRAFT_85	W6YZ01_COCMI	W6ZHF0	W6YZ01	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.909
COCMIDRAFT_85	W6YZM1_COCMI	W6ZHF0	W6YZM1	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.883
COCMIDRAFT_85	W6Z2E1_COCMI	W6ZHF0	W6Z2E1	Uncharacterized protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.946
COCMIDRAFT_85	W6Z4E5_COCMI	W6ZHF0	W6Z4E5	Uncharacterized protein.	Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.	0.908
COCMIDRAFT_85	W6Z4N4_COCMI	W6ZHF0	W6Z4N4	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.979
COCMIDRAFT_85	W6Z7J7_COCMI	W6ZHF0	W6Z7J7	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.918
COCMIDRAFT_85	W6Z8M5_COCMI	W6ZHF0	W6Z8M5	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.931
COCMIDRAFT_85	W6ZC80_COCMI	W6ZHF0	W6ZC80	Uncharacterized protein.	Uncharacterized protein.	0.837
COCMIDRAFT_85	W6ZF56_COCMI	W6ZHF0	W6ZF56	Uncharacterized protein.	V-SNARE coiled-coil homology domain-containing protein.	0.945
COCMIDRAFT_85	W6ZFQ3_COCMI	W6ZHF0	W6ZFQ3	Uncharacterized protein.	Uncharacterized protein.	0.708
COCMIDRAFT_85	W6ZFT3_COCMI	W6ZHF0	W6ZFT3	Uncharacterized protein.	Uncharacterized protein.	0.442
COCMIDRAFT_85	W6ZJK8_COCMI	W6ZHF0	W6ZJK8	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.824
COCMIDRAFT_85	W6ZJZ6_COCMI	W6ZHF0	W6ZJZ6	Uncharacterized protein.	CNH domain-containing protein.	0.568
COCMIDRAFT_85	W6ZL66_COCMI	W6ZHF0	W6ZL66	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.935
COCMIDRAFT_85	W6ZMH7_COCMI	W6ZHF0	W6ZMH7	Uncharacterized protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.581
COCMIDRAFT_85	W6ZSY0_COCMI	W6ZHF0	W6ZSY0	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.891
COCMIDRAFT_85	W6ZTK9_COCMI	W6ZHF0	W6ZTK9	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.904
COCMIDRAFT_85	W7A516_COCMI	W6ZHF0	W7A516	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.904
W6YQ75_COCMI	W6YXY9_COCMI	W6YQ75	W6YXY9	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.674