42 items (Bipolaris oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W6YZ15_COCMI	Uncharacterized protein. (488 aa)
	W6YSM7_COCMI	Uncharacterized protein. (636 aa)
	W6YT12_COCMI	Uncharacterized protein. (234 aa)
	W6YWW5_COCMI	Sm domain-containing protein. (94 aa)
	W6YX04_COCMI	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1449 aa)
	W6YX17_COCMI	Uncharacterized protein. (291 aa)
	W6YYL9_COCMI	Tr-type G domain-containing protein. (993 aa)
	W6YYM3_COCMI	Small nuclear ribonucleoprotein G. (84 aa)
	W6YYY6_COCMI	Uncharacterized protein. (531 aa)
	W6YZN6_COCMI	WD_REPEATS_REGION domain-containing protein. (359 aa)
	W6YZW8_COCMI	Pinin_SDK_memA domain-containing protein. (315 aa)
	W6Z2P4_COCMI	Matrin-type domain-containing protein. (235 aa)
	W6Z2U0_COCMI	Uncharacterized protein. (222 aa)
	W6Z371_COCMI	Sm domain-containing protein. (136 aa)
	W6Z444_COCMI	Sm domain-containing protein. (93 aa)
	W6Z5N6_COCMI	Sm domain-containing protein. (82 aa)
	W6Z727_COCMI	Zn(2)-C6 fungal-type domain-containing protein. (745 aa)
	W6Z7W3_COCMI	Uncharacterized protein. (262 aa)
	W6Z8M6_COCMI	PSP domain-containing protein. (569 aa)
	W6Z8X2_COCMI	Uncharacterized protein; Belongs to the DEAD box helicase family. (399 aa)
	W6Z9S2_COCMI	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
	W6Z9V7_COCMI	WD_REPEATS_REGION domain-containing protein. (334 aa)
	W6ZAT9_COCMI	Uncharacterized protein. (520 aa)
	W6ZBV6_COCMI	Uncharacterized protein. (301 aa)
	W6ZC91_COCMI	RRM domain-containing protein. (381 aa)
	W6ZDB4_COCMI	TPR_REGION domain-containing protein. (930 aa)
	W6ZDK7_COCMI	WD_REPEATS_REGION domain-containing protein. (499 aa)
	W6ZE28_COCMI	RRM domain-containing protein. (155 aa)
	W6ZF40_COCMI	MI domain-containing protein. (689 aa)
	W6ZIM6_COCMI	RRM domain-containing protein. (127 aa)
	W6ZKP2_COCMI	WD_REPEATS_REGION domain-containing protein. (455 aa)
	W6ZL43_COCMI	Uncharacterized protein. (837 aa)
	W6ZLR4_COCMI	Uncharacterized protein; Belongs to the DEAD box helicase family. (707 aa)
	COCMIDRAFT_523	SF3b1 domain-containing protein. (1187 aa)
	W6ZLY6_COCMI	Uncharacterized protein. (684 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
	W6ZP49_COCMI	MPN domain-containing protein. (2328 aa)
	W6ZRI8_COCMI	Uncharacterized protein. (263 aa)
	W6ZRK4_COCMI	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (165 aa)
	W6ZVH5_COCMI	Uncharacterized protein. (266 aa)
	W6ZYS5_COCMI	Small nuclear ribonucleoprotein Sm D2. (117 aa)
	W6ZZ35_COCMI	PPIase cyclophilin-type domain-containing protein. (503 aa)

Your Current Organism:

Bipolaris oryzae

NCBI taxonomy Id: 930090
Other names: B. oryzae ATCC 44560, Bipolaris oryzae ATCC 44560, Cochliobolus miyabeanus ATCC 44560, Cochliobolus miyabeanus WK-1C

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COCMIDRAFT_523	LSM3	W6ZLX9	W6ZMW6	SF3b1 domain-containing protein.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.855
COCMIDRAFT_523	W6YT12_COCMI	W6ZLX9	W6YT12	SF3b1 domain-containing protein.	Uncharacterized protein.	0.890
COCMIDRAFT_523	W6YWW5_COCMI	W6ZLX9	W6YWW5	SF3b1 domain-containing protein.	Sm domain-containing protein.	0.789
COCMIDRAFT_523	W6YX04_COCMI	W6ZLX9	W6YX04	SF3b1 domain-containing protein.	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	0.646
COCMIDRAFT_523	W6YX17_COCMI	W6ZLX9	W6YX17	SF3b1 domain-containing protein.	Uncharacterized protein.	0.475
COCMIDRAFT_523	W6YYL9_COCMI	W6ZLX9	W6YYL9	SF3b1 domain-containing protein.	Tr-type G domain-containing protein.	0.980
COCMIDRAFT_523	W6YYM3_COCMI	W6ZLX9	W6YYM3	SF3b1 domain-containing protein.	Small nuclear ribonucleoprotein G.	0.983
COCMIDRAFT_523	W6YZN6_COCMI	W6ZLX9	W6YZN6	SF3b1 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.626
COCMIDRAFT_523	W6Z2P4_COCMI	W6ZLX9	W6Z2P4	SF3b1 domain-containing protein.	Matrin-type domain-containing protein.	0.997
COCMIDRAFT_523	W6Z2U0_COCMI	W6ZLX9	W6Z2U0	SF3b1 domain-containing protein.	Uncharacterized protein.	0.844
COCMIDRAFT_523	W6Z371_COCMI	W6ZLX9	W6Z371	SF3b1 domain-containing protein.	Sm domain-containing protein.	0.855
COCMIDRAFT_523	W6Z444_COCMI	W6ZLX9	W6Z444	SF3b1 domain-containing protein.	Sm domain-containing protein.	0.990
COCMIDRAFT_523	W6Z5N6_COCMI	W6ZLX9	W6Z5N6	SF3b1 domain-containing protein.	Sm domain-containing protein.	0.946
COCMIDRAFT_523	W6Z727_COCMI	W6ZLX9	W6Z727	SF3b1 domain-containing protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.830
COCMIDRAFT_523	W6Z7W3_COCMI	W6ZLX9	W6Z7W3	SF3b1 domain-containing protein.	Uncharacterized protein.	0.905
COCMIDRAFT_523	W6Z8M6_COCMI	W6ZLX9	W6Z8M6	SF3b1 domain-containing protein.	PSP domain-containing protein.	0.999
COCMIDRAFT_523	W6Z8X2_COCMI	W6ZLX9	W6Z8X2	SF3b1 domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.510
COCMIDRAFT_523	W6Z9S2_COCMI	W6ZLX9	W6Z9S2	SF3b1 domain-containing protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.627
COCMIDRAFT_523	W6ZAT9_COCMI	W6ZLX9	W6ZAT9	SF3b1 domain-containing protein.	Uncharacterized protein.	0.994
COCMIDRAFT_523	W6ZBV6_COCMI	W6ZLX9	W6ZBV6	SF3b1 domain-containing protein.	Uncharacterized protein.	0.656