65 items (Bipolaris oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W6Z1X2_COCMI	Uncharacterized protein. (299 aa)
	W6YPI1_COCMI	Uncharacterized protein. (113 aa)
	W6YQ67_COCMI	Uncharacterized protein. (106 aa)
	W6YQL5_COCMI	Uncharacterized protein. (255 aa)
	W6YSP0_COCMI	Uncharacterized protein. (135 aa)
	W6YU04_COCMI	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (330 aa)
	W6YV50_COCMI	Uncharacterized protein. (217 aa)
	W6YVJ7_COCMI	Uncharacterized protein. (465 aa)
	W6YWF8_COCMI	KOW domain-containing protein. (519 aa)
	W6YWL0_COCMI	MRP-S28 domain-containing protein. (389 aa)
	W6YWT2_COCMI	Arf-GAP domain-containing protein. (417 aa)
	W6YX79_COCMI	S4 RNA-binding domain-containing protein. (424 aa)
	W6YXR9_COCMI	Uncharacterized protein. (350 aa)
	W6YXZ6_COCMI	Uncharacterized protein. (290 aa)
	W6YYN6_COCMI	Ribosomal_S7 domain-containing protein. (346 aa)
	W6YYV9_COCMI	Uncharacterized protein. (479 aa)
	W6Z0L6_COCMI	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (133 aa)
	W6Z1W9_COCMI	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (125 aa)
	W6Z207_COCMI	Uncharacterized protein. (335 aa)
	W6Z256_COCMI	Uncharacterized protein. (58 aa)
	W6Z257_COCMI	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family. (249 aa)
	W6Z2W4_COCMI	MRP-L46 domain-containing protein. (337 aa)
	W6Z3Y8_COCMI	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (422 aa)
	W6Z457_COCMI	Mitoc_mL59 domain-containing protein. (209 aa)
	W6Z473_COCMI	Uncharacterized protein. (142 aa)
	W6Z4B1_COCMI	Uncharacterized protein. (262 aa)
	W6Z4T1_COCMI	L51_S25_CI-B8 domain-containing protein. (138 aa)
	W6Z5S2_COCMI	Ribosomal_L2_C domain-containing protein. (381 aa)
	W6Z8G4_COCMI	Uncharacterized protein. (201 aa)
	W6Z964_COCMI	L51_S25_CI-B8 domain-containing protein. (206 aa)
	W6Z9K0_COCMI	Uncharacterized protein. (974 aa)
	W6ZAL1_COCMI	Uncharacterized protein. (98 aa)
	W6ZC67_COCMI	Uncharacterized protein. (200 aa)
	W6ZC77_COCMI	Uncharacterized protein. (220 aa)
	W6ZC94_COCMI	Uncharacterized protein. (335 aa)
	W6ZCG2_COCMI	Uncharacterized protein. (455 aa)
	W6ZET7_COCMI	Uncharacterized protein. (161 aa)
	W6ZEU4_COCMI	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family. (251 aa)
	W6ZEY5_COCMI	Uncharacterized protein. (418 aa)
	W6ZF12_COCMI	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (110 aa)
	W6ZF51_COCMI	Uncharacterized protein. (269 aa)
	W6ZFM8_COCMI	Uncharacterized protein. (411 aa)
	W6ZFR7_COCMI	Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated. (376 aa)
	W6ZG84_COCMI	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (383 aa)
	W6ZGE3_COCMI	Ribosomal_S10 domain-containing protein. (344 aa)
	W6ZGS9_COCMI	Uncharacterized protein. (563 aa)
	W6ZGW5_COCMI	Uncharacterized protein; Belongs to the universal ribosomal protein uL6 family. (256 aa)
	W6ZK13_COCMI	Uncharacterized protein. (175 aa)
	W6ZK63_COCMI	cobW domain-containing protein. (272 aa)
	W6ZKZ4_COCMI	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (179 aa)
	W6ZL60_COCMI	Ribosomal_L30 domain-containing protein. (92 aa)
	W6ZLS8_COCMI	Uncharacterized protein. (401 aa)
	W6ZLT9_COCMI	Uncharacterized protein. (249 aa)
	W6ZM58_COCMI	Uncharacterized protein. (455 aa)
	W6ZN17_COCMI	37S ribosomal protein S25, mitochondrial. (255 aa)
	W6ZN37_COCMI	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (177 aa)
	W6ZR76_COCMI	Uncharacterized protein. (293 aa)
	W6ZRN7_COCMI	Uncharacterized protein. (217 aa)
	W6ZRW2_COCMI	Uncharacterized protein. (217 aa)
	W6ZRZ4_COCMI	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (93 aa)
	W6ZSC2_COCMI	Uncharacterized protein. (496 aa)
	W6ZT83_COCMI	Uncharacterized protein. (178 aa)
	W6ZUY6_COCMI	Uncharacterized protein. (207 aa)
	W7A1R1_COCMI	Uncharacterized protein. (112 aa)
	W7A4I0_COCMI	Ribosomal_L18e/L15P domain-containing protein. (331 aa)

Your Current Organism:

Bipolaris oryzae

NCBI taxonomy Id: 930090
Other names: B. oryzae ATCC 44560, Bipolaris oryzae ATCC 44560, Cochliobolus miyabeanus ATCC 44560, Cochliobolus miyabeanus WK-1C

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W6YPI1_COCMI	W6YQ67_COCMI	W6YPI1	W6YQ67	Uncharacterized protein.	Uncharacterized protein.	0.967
W6YPI1_COCMI	W6YQL5_COCMI	W6YPI1	W6YQL5	Uncharacterized protein.	Uncharacterized protein.	0.991
W6YPI1_COCMI	W6YSP0_COCMI	W6YPI1	W6YSP0	Uncharacterized protein.	Uncharacterized protein.	0.992
W6YPI1_COCMI	W6YU04_COCMI	W6YPI1	W6YU04	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
W6YPI1_COCMI	W6YV50_COCMI	W6YPI1	W6YV50	Uncharacterized protein.	Uncharacterized protein.	0.902
W6YPI1_COCMI	W6YVJ7_COCMI	W6YPI1	W6YVJ7	Uncharacterized protein.	Uncharacterized protein.	0.475
W6YPI1_COCMI	W6YWF8_COCMI	W6YPI1	W6YWF8	Uncharacterized protein.	KOW domain-containing protein.	0.475
W6YPI1_COCMI	W6YWL0_COCMI	W6YPI1	W6YWL0	Uncharacterized protein.	MRP-S28 domain-containing protein.	0.999
W6YPI1_COCMI	W6YX79_COCMI	W6YPI1	W6YX79	Uncharacterized protein.	S4 RNA-binding domain-containing protein.	0.957
W6YPI1_COCMI	W6YXR9_COCMI	W6YPI1	W6YXR9	Uncharacterized protein.	Uncharacterized protein.	0.996
W6YPI1_COCMI	W6YXZ6_COCMI	W6YPI1	W6YXZ6	Uncharacterized protein.	Uncharacterized protein.	0.997
W6YPI1_COCMI	W6YYN6_COCMI	W6YPI1	W6YYN6	Uncharacterized protein.	Ribosomal_S7 domain-containing protein.	0.999
W6YPI1_COCMI	W6YYV9_COCMI	W6YPI1	W6YYV9	Uncharacterized protein.	Uncharacterized protein.	0.998
W6YPI1_COCMI	W6Z0L6_COCMI	W6YPI1	W6Z0L6	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.947
W6YPI1_COCMI	W6Z1W9_COCMI	W6YPI1	W6Z1W9	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	0.977
W6YPI1_COCMI	W6Z1X2_COCMI	W6YPI1	W6Z1X2	Uncharacterized protein.	Uncharacterized protein.	0.877
W6YPI1_COCMI	W6Z207_COCMI	W6YPI1	W6Z207	Uncharacterized protein.	Uncharacterized protein.	0.999
W6YPI1_COCMI	W6Z256_COCMI	W6YPI1	W6Z256	Uncharacterized protein.	Uncharacterized protein.	0.997
W6YPI1_COCMI	W6Z257_COCMI	W6YPI1	W6Z257	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	0.998
W6YPI1_COCMI	W6Z2W4_COCMI	W6YPI1	W6Z2W4	Uncharacterized protein.	MRP-L46 domain-containing protein.	0.993