99 items (Bipolaris oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W6YY99_COCMI	Carbohydrate-binding module family 50 protein. (615 aa)
	W6YYQ5_COCMI	Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (771 aa)
	W6YYU7_COCMI	Protein kinase domain-containing protein. (1083 aa)
	W6YYV1_COCMI	ADF-H domain-containing protein. (142 aa)
	W6Z055_COCMI	Sec3-PIP2_bind domain-containing protein. (1579 aa)
	W6Z0A2_COCMI	Uncharacterized protein. (486 aa)
	W6Z0A7_COCMI	EF-hand domain-containing protein. (470 aa)
	W6Z0W2_COCMI	Uncharacterized protein. (2034 aa)
	W6Z0W3_COCMI	Uncharacterized protein. (402 aa)
	W6Z117_COCMI	Uncharacterized protein. (400 aa)
	W6Z1E3_COCMI	Uncharacterized protein. (299 aa)
	SEY1	Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily. (884 aa)
	W6Z2X9_COCMI	VHS domain-containing protein. (424 aa)
	W6Z305_COCMI	Uncharacterized protein. (580 aa)
	W6Z454_COCMI	F-box domain-containing protein. (910 aa)
	W6Z464_COCMI	SAC domain-containing protein. (1250 aa)
	W6Z4I2_COCMI	Uncharacterized protein; Belongs to the heat shock protein 70 family. (675 aa)
	W6Z4I3_COCMI	C2 domain-containing protein. (1021 aa)
	W6Z4S2_COCMI	Rho-GAP domain-containing protein. (1028 aa)
	W6Z4S4_COCMI	Uncharacterized protein. (640 aa)
	W6Z4X0_COCMI	Protein kinase domain-containing protein. (1304 aa)
	W6Z593_COCMI	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (341 aa)
	W6Z5I4_COCMI	Uncharacterized protein. (1363 aa)
	W6Z5N9_COCMI	Uncharacterized protein. (326 aa)
	W6Z5T3_COCMI	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. (798 aa)
	W6Z6D6_COCMI	Uncharacterized protein. (939 aa)
	W6Z6J9_COCMI	Usp domain-containing protein. (447 aa)
	W6Z806_COCMI	AAA domain-containing protein; Belongs to the AAA ATPase family. (750 aa)
	W6Z826_COCMI	Uncharacterized protein. (772 aa)
	W6Z8C2_COCMI	Uncharacterized protein. (723 aa)
	W6Z8D2_COCMI	Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. (1060 aa)
	W6Z8F8_COCMI	Protein kinase domain-containing protein. (856 aa)
	W6Z978_COCMI	Uncharacterized protein. (458 aa)
	W6Z991_COCMI	Uncharacterized protein. (1244 aa)
	W6Z9R5_COCMI	Glycosyltransferase family 31 protein. (473 aa)
	W6Z9Z9_COCMI	Uncharacterized protein. (305 aa)
	W6ZAP2_COCMI	EH domain-containing protein. (693 aa)
	W6ZB92_COCMI	Peptidase_M3 domain-containing protein. (724 aa)
	W6ZBG0_COCMI	Glycosyltransferase family 31 protein. (446 aa)
	W6ZBL0_COCMI	Rab-GAP TBC domain-containing protein. (1092 aa)
	W6ZCG6_COCMI	Uncharacterized protein. (1012 aa)
	W6ZCW0_COCMI	Uncharacterized protein. (656 aa)
	W6ZD62_COCMI	Uncharacterized protein. (997 aa)
	W6ZDA8_COCMI	Uncharacterized protein. (436 aa)
	W6ZDM6_COCMI	Uncharacterized protein. (357 aa)
	W6ZDR8_COCMI	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (799 aa)
	W6YXP0_COCMI	UDENN domain-containing protein. (686 aa)
	W6YWF1_COCMI	Uncharacterized protein. (618 aa)
	W6YWD0_COCMI	Uncharacterized protein. (882 aa)
	W6YVT0_COCMI	Glycosyltransferase family 31 protein. (472 aa)
	W6YVI8_COCMI	Uncharacterized protein. (1402 aa)
	W6YVH7_COCMI	Sec8_exocyst domain-containing protein. (1014 aa)
	W6YVF9_COCMI	Uncharacterized protein. (1244 aa)
	W6YUG0_COCMI	Uncharacterized protein. (1182 aa)
	W6YSC0_COCMI	BTB domain-containing protein. (775 aa)
	W6YRR0_COCMI	STAS domain-containing protein. (843 aa)
	W6YRP9_COCMI	Uncharacterized protein. (505 aa)
	W6YR35_COCMI	Uncharacterized protein. (388 aa)
	W6YQJ3_COCMI	Uncharacterized protein. (1163 aa)
	W6YPC1_COCMI	PH domain-containing protein. (1442 aa)
	W6YNS2_COCMI	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (693 aa)
	W6YM15_COCMI	Uncharacterized protein. (369 aa)
	W6ZJ34_COCMI	Uncharacterized protein. (307 aa)
	W6ZDU2_COCMI	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (618 aa)
	W6ZE11_COCMI	Uncharacterized protein. (375 aa)
	W6ZE16_COCMI	Uncharacterized protein. (444 aa)
	W6ZEJ5_COCMI	Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks; Belongs to the WD repeat ARPC1 family. (364 aa)
	W6ZET4_COCMI	Uncharacterized protein. (1009 aa)
	W6ZFV3_COCMI	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2074 aa)
	W6ZH85_COCMI	Uncharacterized protein. (1037 aa)
	W6ZHD0_COCMI	SH3 domain-containing protein. (1240 aa)
	W6ZHT4_COCMI	Uncharacterized protein. (800 aa)
	W6ZHW8_COCMI	Ras-GAP domain-containing protein. (779 aa)
	W6ZJM6_COCMI	WH2 domain-containing protein. (475 aa)
	W6ZL99_COCMI	Uncharacterized protein. (145 aa)
	W6ZKK3_COCMI	Glycosyltransferase family 31 protein. (487 aa)
	W6ZIM2_COCMI	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (400 aa)
	W6ZKC2_COCMI	Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family. (169 aa)
	W6ZK88_COCMI	Uncharacterized protein. (682 aa)
	W6YYE3_COCMI	BAR domain-containing protein. (261 aa)
	W7A3S3_COCMI	Uncharacterized protein. (1744 aa)
	W7A2V9_COCMI	CRAL-TRIO domain-containing protein. (412 aa)
	W6ZZW3_COCMI	Mechanosensitive ion channel protein. (892 aa)
	W6ZWZ5_COCMI	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (375 aa)
	W6ZUR4_COCMI	Uncharacterized protein. (354 aa)
	W6ZUH8_COCMI	Uncharacterized protein. (740 aa)
	W6ZS86_COCMI	Uncharacterized protein. (763 aa)
	W6ZRU7_COCMI	Uncharacterized protein. (504 aa)
	W6ZRE6_COCMI	AIP3 domain-containing protein. (1007 aa)
	W6ZQS4_COCMI	Uncharacterized protein. (360 aa)
	W6ZP40_COCMI	Uncharacterized protein. (1394 aa)
	W6ZNI3_COCMI	Protein YOP1. (171 aa)
	W6ZNA6_COCMI	Uncharacterized protein. (100 aa)
	W6ZN97_COCMI	Uncharacterized protein. (1425 aa)
	W6ZMZ1_COCMI	Protein kinase domain-containing protein. (1055 aa)
	W6ZMS3_COCMI	Uncharacterized protein. (440 aa)
	W6ZLP0_COCMI	Zn(2)-C6 fungal-type domain-containing protein. (731 aa)
	W6ZLK5_COCMI	Uncharacterized protein; Belongs to the OSBP family. (576 aa)
	W6ZLB2_COCMI	Uncharacterized protein. (842 aa)

Your Current Organism:

Bipolaris oryzae

NCBI taxonomy Id: 930090
Other names: B. oryzae ATCC 44560, Bipolaris oryzae ATCC 44560, Cochliobolus miyabeanus ATCC 44560, Cochliobolus miyabeanus WK-1C

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SEY1	W6ZNI3_COCMI	W6Z1Q7	W6ZNI3	Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.	Protein YOP1.	0.850
W6YNS2_COCMI	W6YYE3_COCMI	W6YNS2	W6YYE3	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	BAR domain-containing protein.	0.465
W6YNS2_COCMI	W6ZE11_COCMI	W6YNS2	W6ZE11	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.505
W6YNS2_COCMI	W6ZN97_COCMI	W6YNS2	W6ZN97	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.408
W6YPC1_COCMI	W6Z593_COCMI	W6YPC1	W6Z593	PH domain-containing protein.	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.732
W6YPC1_COCMI	W6ZWZ5_COCMI	W6YPC1	W6ZWZ5	PH domain-containing protein.	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.531
W6YQJ3_COCMI	W6YUG0_COCMI	W6YQJ3	W6YUG0	Uncharacterized protein.	Uncharacterized protein.	0.868
W6YQJ3_COCMI	W6Z4S2_COCMI	W6YQJ3	W6Z4S2	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.492
W6YQJ3_COCMI	W6ZE11_COCMI	W6YQJ3	W6ZE11	Uncharacterized protein.	Uncharacterized protein.	0.483
W6YQJ3_COCMI	W6ZK88_COCMI	W6YQJ3	W6ZK88	Uncharacterized protein.	Uncharacterized protein.	0.778
W6YQJ3_COCMI	W6ZL99_COCMI	W6YQJ3	W6ZL99	Uncharacterized protein.	Uncharacterized protein.	0.403
W6YQJ3_COCMI	W6ZP40_COCMI	W6YQJ3	W6ZP40	Uncharacterized protein.	Uncharacterized protein.	0.666
W6YSC0_COCMI	W6ZE11_COCMI	W6YSC0	W6ZE11	BTB domain-containing protein.	Uncharacterized protein.	0.490
W6YSC0_COCMI	W6ZJM6_COCMI	W6YSC0	W6ZJM6	BTB domain-containing protein.	WH2 domain-containing protein.	0.401
W6YSC0_COCMI	W6ZMZ1_COCMI	W6YSC0	W6ZMZ1	BTB domain-containing protein.	Protein kinase domain-containing protein.	0.485
W6YSC0_COCMI	W6ZN97_COCMI	W6YSC0	W6ZN97	BTB domain-containing protein.	Uncharacterized protein.	0.680
W6YSC0_COCMI	W6ZP40_COCMI	W6YSC0	W6ZP40	BTB domain-containing protein.	Uncharacterized protein.	0.526
W6YUG0_COCMI	W6YQJ3_COCMI	W6YUG0	W6YQJ3	Uncharacterized protein.	Uncharacterized protein.	0.868
W6YUG0_COCMI	W6YVH7_COCMI	W6YUG0	W6YVH7	Uncharacterized protein.	Sec8_exocyst domain-containing protein.	0.473
W6YUG0_COCMI	W6YYQ5_COCMI	W6YUG0	W6YYQ5	Uncharacterized protein.	Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.560