7 items (Bipolaris oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W6Z4J8_COCMI	Uncharacterized protein. (886 aa)
	W6YVE9_COCMI	Lipase_3 domain-containing protein. (402 aa)
	W6Z1B9_COCMI	Uncharacterized protein. (354 aa)
	W6ZIZ5_COCMI	Uncharacterized protein. (301 aa)
	COCMIDRAFT_988	Lipase_3 domain-containing protein. (634 aa)
	W6ZQ39_COCMI	Lipase_3 domain-containing protein. (566 aa)
	W7A0X3_COCMI	Uncharacterized protein. (663 aa)

Your Current Organism:

Bipolaris oryzae

NCBI taxonomy Id: 930090
Other names: B. oryzae ATCC 44560, Bipolaris oryzae ATCC 44560, Cochliobolus miyabeanus ATCC 44560, Cochliobolus miyabeanus WK-1C

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COCMIDRAFT_988	W6ZQ39_COCMI	W6ZJP6	W6ZQ39	Lipase_3 domain-containing protein.	Lipase_3 domain-containing protein.	0.904
COCMIDRAFT_988	W7A0X3_COCMI	W6ZJP6	W7A0X3	Lipase_3 domain-containing protein.	Uncharacterized protein.	0.567
W6ZQ39_COCMI	COCMIDRAFT_988	W6ZQ39	W6ZJP6	Lipase_3 domain-containing protein.	Lipase_3 domain-containing protein.	0.904
W6ZQ39_COCMI	W7A0X3_COCMI	W6ZQ39	W7A0X3	Lipase_3 domain-containing protein.	Uncharacterized protein.	0.454
W7A0X3_COCMI	COCMIDRAFT_988	W7A0X3	W6ZJP6	Uncharacterized protein.	Lipase_3 domain-containing protein.	0.567
W7A0X3_COCMI	W6ZQ39_COCMI	W7A0X3	W6ZQ39	Uncharacterized protein.	Lipase_3 domain-containing protein.	0.454