(22 nodes) RNA polymerase III complex, and RNA polymerase I complex network (Sarcophilus harrisii)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RRN3	RRN3 homolog, RNA polymerase I transcription factor. (556 aa)
	BDP1	SANT domain-containing protein. (2469 aa)
	POLR1D	RNA polymerase I and III subunit D. (129 aa)
	ZNRD1	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (132 aa)
	BRF1	BRF1 RNA polymerase III transcription initiation factor subunit. (624 aa)
	G3VK35_SARHA	Uncharacterized protein. (349 aa)
	MAF1	Repressor of RNA polymerase III transcription MAF1; Element of the TORC1 signaling pathway that acts as a mediator of diverse signals and that represses RNA polymerase III transcription. Inhibits the de novo assembly of TFIIIB onto DNA. Belongs to the MAF1 family. (259 aa)
	POLR3G	Uncharacterized protein. (228 aa)
	CRCP	CGRP receptor component. (145 aa)
	POLR3A	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1477 aa)
	G3W186_SARHA	Uncharacterized protein. (368 aa)
	POLR3H	RNA polymerase III subunit H. (209 aa)
	BRF2	BRF2 RNA polymerase III transcription initiation factor subunit. (365 aa)
	POLR3B	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1133 aa)
	POLR1C	RNA polymerase I and III subunit C. (339 aa)
	POLR1A	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1723 aa)
	POLR1E	RNA polymerase I subunit E. (359 aa)
	POLR1B	Uncharacterized protein. (353 aa)
	POLR3F	RNA polymerase III subunit F. (310 aa)
	POLR3D	RNA polymerase III subunit D. (341 aa)
	POLR3C	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (535 aa)
	POLR3GL	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (237 aa)

Your Current Organism:

Sarcophilus harrisii

NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BDP1	BRF1	ENSSHAP00000001241	ENSSHAP00000002655	SANT domain-containing protein.	BRF1 RNA polymerase III transcription initiation factor subunit.	0.991
BDP1	BRF2	ENSSHAP00000001241	ENSSHAP00000013948	SANT domain-containing protein.	BRF2 RNA polymerase III transcription initiation factor subunit.	0.972
BDP1	CRCP	ENSSHAP00000001241	ENSSHAP00000008441	SANT domain-containing protein.	CGRP receptor component.	0.951
BDP1	G3W186_SARHA	ENSSHAP00000001241	ENSSHAP00000009191	SANT domain-containing protein.	Uncharacterized protein.	0.971
BDP1	MAF1	ENSSHAP00000001241	ENSSHAP00000007189	SANT domain-containing protein.	Repressor of RNA polymerase III transcription MAF1; Element of the TORC1 signaling pathway that acts as a mediator of diverse signals and that represses RNA polymerase III transcription. Inhibits the de novo assembly of TFIIIB onto DNA. Belongs to the MAF1 family.	0.571
BDP1	POLR1A	ENSSHAP00000001241	ENSSHAP00000017347	SANT domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.869
BDP1	POLR1B	ENSSHAP00000001241	ENSSHAP00000020054	SANT domain-containing protein.	Uncharacterized protein.	0.755
BDP1	POLR1C	ENSSHAP00000001241	ENSSHAP00000017005	SANT domain-containing protein.	RNA polymerase I and III subunit C.	0.925
BDP1	POLR1D	ENSSHAP00000001241	ENSSHAP00000001335	SANT domain-containing protein.	RNA polymerase I and III subunit D.	0.810
BDP1	POLR3A	ENSSHAP00000001241	ENSSHAP00000008761	SANT domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.974
BDP1	POLR3B	ENSSHAP00000001241	ENSSHAP00000014040	SANT domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.952
BDP1	POLR3C	ENSSHAP00000001241	ENSSHAP00000021936	SANT domain-containing protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.951
BDP1	POLR3D	ENSSHAP00000001241	ENSSHAP00000021554	SANT domain-containing protein.	RNA polymerase III subunit D.	0.949
BDP1	POLR3F	ENSSHAP00000001241	ENSSHAP00000021428	SANT domain-containing protein.	RNA polymerase III subunit F.	0.978
BDP1	POLR3G	ENSSHAP00000001241	ENSSHAP00000007651	SANT domain-containing protein.	Uncharacterized protein.	0.828
BDP1	POLR3GL	ENSSHAP00000001241	ENSSHAP00000022024	SANT domain-containing protein.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.828
BDP1	POLR3H	ENSSHAP00000001241	ENSSHAP00000011882	SANT domain-containing protein.	RNA polymerase III subunit H.	0.938
BDP1	ZNRD1	ENSSHAP00000001241	ENSSHAP00000001742	SANT domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.477
BRF1	BDP1	ENSSHAP00000002655	ENSSHAP00000001241	BRF1 RNA polymerase III transcription initiation factor subunit.	SANT domain-containing protein.	0.991
BRF1	BRF2	ENSSHAP00000002655	ENSSHAP00000013948	BRF1 RNA polymerase III transcription initiation factor subunit.	BRF2 RNA polymerase III transcription initiation factor subunit.	0.581