(45 nodes) Ribosome network (Sarcophilus harrisii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPS5	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (204 aa)
	RPS8	Ribosomal protein S8. (188 aa)
	RPL27A	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (148 aa)
	RPL18A	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (165 aa)
	RPS10	S10_plectin domain-containing protein. (165 aa)
	RPL21	Uncharacterized protein. (161 aa)
	RPL14	Ribosomal protein L14. (174 aa)
	RPL4	Ribosomal protein L4. (428 aa)
	G3VJX7_SARHA	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (185 aa)
	RPL10	Ribosomal protein L10. (214 aa)
	RPL35A	Uncharacterized protein. (110 aa)
	RPS13	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (155 aa)
	RPL7A	Ribosomal protein L7a. (266 aa)
	RPL35	Ribosomal protein L35. (125 aa)
	RPL9	Ribosomal protein L9. (192 aa)
	RPS11	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (158 aa)
	RPS6	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	RPS29	Ribosomal protein S29. (56 aa)
	RPL5	Ribosomal_L18_c domain-containing protein. (297 aa)
	RPL18	Ribosomal protein L18. (190 aa)
	RPS19	Ribosomal protein S19. (157 aa)
	RPL29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (170 aa)
	RPSA	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Also acts as a receptor for several other ligands, including the pathogenic prion protein, viruses, and bacteri [...] (295 aa)
	UBA52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	RPS24	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (145 aa)
	RPS28	Uncharacterized protein. (45 aa)
	RPL24	Ribosomal protein L24. (157 aa)
	G3W2X3_SARHA	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (112 aa)
	RPL38	Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
	G3W5Y0_SARHA	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (172 aa)
	G3W9S0_SARHA	Uncharacterized protein. (147 aa)
	RPS20	Ribosomal_S10 domain-containing protein. (119 aa)
	RPL31	Uncharacterized protein. (125 aa)
	RPL32	Ribosomal protein L32. (135 aa)
	RPS7	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (185 aa)
	RPL37A	Ribosomal protein L37a. (92 aa)
	G3WK68_SARHA	Uncharacterized protein. (169 aa)
	RPL36	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (105 aa)
	RPL8	Ribosomal protein L8. (257 aa)
	RPS21	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
	RPL37	Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
	RPS17	Ribosomal protein S17. (113 aa)
	RPL23	Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	RPL12	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (182 aa)
	RPS14	Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (157 aa)

Your Current Organism:

Sarcophilus harrisii

NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3VJX7_SARHA	G3W2X3_SARHA	ENSSHAP00000003482	ENSSHAP00000009778	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.998
G3VJX7_SARHA	G3W5Y0_SARHA	ENSSHAP00000003482	ENSSHAP00000010835	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.998
G3VJX7_SARHA	G3W9S0_SARHA	ENSSHAP00000003482	ENSSHAP00000012175	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	Uncharacterized protein.	0.999
G3VJX7_SARHA	G3WK68_SARHA	ENSSHAP00000003482	ENSSHAP00000015823	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	Uncharacterized protein.	0.999
G3VJX7_SARHA	RPL10	ENSSHAP00000003482	ENSSHAP00000004507	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	Ribosomal protein L10.	0.999
G3VJX7_SARHA	RPL12	ENSSHAP00000003482	ENSSHAP00000021067	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	0.998
G3VJX7_SARHA	RPL14	ENSSHAP00000003482	ENSSHAP00000001788	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	Ribosomal protein L14.	0.999
G3VJX7_SARHA	RPL18	ENSSHAP00000003482	ENSSHAP00000007553	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	Ribosomal protein L18.	0.998
G3VJX7_SARHA	RPL18A	ENSSHAP00000003482	ENSSHAP00000000457	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
G3VJX7_SARHA	RPL21	ENSSHAP00000003482	ENSSHAP00000000945	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	Uncharacterized protein.	0.999
G3VJX7_SARHA	RPL23	ENSSHAP00000003482	ENSSHAP00000020275	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.999
G3VJX7_SARHA	RPL24	ENSSHAP00000003482	ENSSHAP00000009508	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	Ribosomal protein L24.	0.999
G3VJX7_SARHA	RPL27A	ENSSHAP00000003482	ENSSHAP00000000163	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.	0.999
G3VJX7_SARHA	RPL29	ENSSHAP00000003482	ENSSHAP00000007898	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999
G3VJX7_SARHA	RPL31	ENSSHAP00000003482	ENSSHAP00000013693	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	Uncharacterized protein.	0.999
G3VJX7_SARHA	RPL32	ENSSHAP00000003482	ENSSHAP00000014981	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	Ribosomal protein L32.	0.999
G3VJX7_SARHA	RPL35	ENSSHAP00000003482	ENSSHAP00000005445	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	Ribosomal protein L35.	0.999
G3VJX7_SARHA	RPL35A	ENSSHAP00000003482	ENSSHAP00000004536	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	Uncharacterized protein.	0.999
G3VJX7_SARHA	RPL36	ENSSHAP00000003482	ENSSHAP00000015837	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.998
G3VJX7_SARHA	RPL37	ENSSHAP00000003482	ENSSHAP00000016418	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999