70 items (Sarcophilus harrisii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MRS2	Magnesium transporter. (382 aa)
	G3VTR0_SARHA	Uncharacterized protein. (216 aa)
	MCUB	Mitochondrial calcium uniporter dominant negative beta subunit. (319 aa)
	TIMM21	Translocase of inner mitochondrial membrane 21. (261 aa)
	ABCB7	ATP binding cassette subfamily B member 7. (753 aa)
	SFXN1	Sidoreflexin. (322 aa)
	CHCHD4	Coiled-coil-helix-coiled-coil-helix domain containing 4. (141 aa)
	G3VHY6_SARHA	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (314 aa)
	TIMM17B	Mitochondrial import inner membrane translocase subunit TIM17; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (173 aa)
	SLC25A4	Solute carrier family 25 member 4; Belongs to the mitochondrial carrier (TC 2.A.29) family. (298 aa)
	TOMM40	Translocase of outer mitochondrial membrane 40. (362 aa)
	LOC100935317	Uncharacterized protein. (102 aa)
	SLC25A22	Solute carrier family 25 member 22; Belongs to the mitochondrial carrier (TC 2.A.29) family. (258 aa)
	LOC100928420	Uncharacterized protein. (177 aa)
	G3VAL5_SARHA	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (256 aa)
	SLC25A38	Solute carrier family 25 member 38; Belongs to the mitochondrial carrier (TC 2.A.29) family. (328 aa)
	G3VVL1_SARHA	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (316 aa)
	MCU	Mitochondrial calcium uniporter. (312 aa)
	SLC25A40	Solute carrier family 25 member 40; Belongs to the mitochondrial carrier (TC 2.A.29) family. (356 aa)
	SLC25A33	Solute carrier family 25 member 33; Belongs to the mitochondrial carrier (TC 2.A.29) family. (303 aa)
	TOMM70	Translocase of outer mitochondrial membrane 70. (501 aa)
	G3VYK7_SARHA	Sidoreflexin. (321 aa)
	TIMM23B	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (174 aa)
	G3VUE1_SARHA	Uncharacterized protein. (75 aa)
	G3VZH0_SARHA	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (484 aa)
	GRPEL1	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. (217 aa)
	SLC25A15	Solute carrier family 25 member 15; Belongs to the mitochondrial carrier (TC 2.A.29) family. (301 aa)
	SLC25A18	Solute carrier family 25 member 18; Belongs to the mitochondrial carrier (TC 2.A.29) family. (280 aa)
	SFXN5	Sideroflexin 5. (212 aa)
	TIMM44	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family. (455 aa)
	LETM1	Leucine zipper and EF-hand containing transmembrane protein 1. (764 aa)
	MICU1	Uncharacterized protein. (247 aa)
	GRPEL2	GrpE like 2, mitochondrial; Belongs to the GrpE family. (200 aa)
	ABCB8	ATP binding cassette subfamily B member 8. (716 aa)
	SLC41A3	Solute carrier family 41 member 3. (481 aa)
	SLC25A3	Solute carrier family 25 member 3; Belongs to the mitochondrial carrier (TC 2.A.29) family. (360 aa)
	PAM16	Presequence translocase associated motor 16. (125 aa)
	SLC25A41	Solute carrier family 25 member 41; Belongs to the mitochondrial carrier (TC 2.A.29) family. (372 aa)
	DNAJC15	DnaJ heat shock protein family (Hsp40) member C15. (148 aa)
	SLC25A53	Solute carrier family 25 member 53; Belongs to the mitochondrial carrier (TC 2.A.29) family. (306 aa)
	MICU3	Mitochondrial calcium uptake family member 3. (366 aa)
	SLC25A28	Solute carrier family 25 member 28; Belongs to the mitochondrial carrier (TC 2.A.29) family. (279 aa)
	SLC25A31	Solute carrier family 25 member 31; Belongs to the mitochondrial carrier (TC 2.A.29) family. (241 aa)
	UCP3	Uncoupling protein 3; Belongs to the mitochondrial carrier (TC 2.A.29) family. (311 aa)
	UCP2	Uncoupling protein 2; Belongs to the mitochondrial carrier (TC 2.A.29) family. (309 aa)
	TST	Sulfurtransferase. (298 aa)
	PNPT1	Polyribonucleotide nucleotidyltransferase 1. (494 aa)
	MAIP1	Matrix AAA peptidase interacting protein 1. (181 aa)
	SFXN4	Uncharacterized protein. (316 aa)
	SLC25A29	Solute carrier family 25 member 29; Belongs to the mitochondrial carrier (TC 2.A.29) family. (288 aa)
	SLC8B1	Solute carrier family 8 member B1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (584 aa)
	SLC25A12	Solute carrier family 25 member 12; Belongs to the mitochondrial carrier (TC 2.A.29) family. (677 aa)
	BHLHA15	Basic helix-loop-helix family member a15. (175 aa)
	SLC25A37	Solute carrier family 25 member 37; Belongs to the mitochondrial carrier (TC 2.A.29) family. (271 aa)
	SLC25A39	Solute carrier family 25 member 39; Belongs to the mitochondrial carrier (TC 2.A.29) family. (360 aa)
	TOMM20	Translocase of outer mitochondrial membrane 20. (145 aa)
	AIFM1	Apoptosis inducing factor mitochondria associated 1. (580 aa)
	G3WUG4_SARHA	Uncharacterized protein. (218 aa)
	CCDC51	Uncharacterized protein. (420 aa)
	STOML2	Stomatin like 2. (356 aa)
	TOMM40L	Translocase of outer mitochondrial membrane 40 like. (308 aa)
	SLC25A51	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (325 aa)
	HSPD1	Heat shock protein family D (Hsp60) member 1; Belongs to the chaperonin (HSP60) family. (573 aa)
	SLC25A36	Solute carrier family 25 member 36; Belongs to the mitochondrial carrier (TC 2.A.29) family. (313 aa)
	G3X158_SARHA	Uncharacterized protein. (73 aa)
	UCP1	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (218 aa)
	DNAJC19	DnaJ heat shock protein family (Hsp40) member C19. (114 aa)
	SFXN2	Sidoreflexin. (327 aa)
	MPC2	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family. (146 aa)
	C3orf18	Chromosome 3 open reading frame 18. (162 aa)

Your Current Organism:

Sarcophilus harrisii

NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCB7	ABCB8	ENSSHAP00000004487	ENSSHAP00000010944	ATP binding cassette subfamily B member 7.	ATP binding cassette subfamily B member 8.	0.662
ABCB7	SLC25A28	ENSSHAP00000004487	ENSSHAP00000014992	ATP binding cassette subfamily B member 7.	Solute carrier family 25 member 28; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.507
ABCB7	SLC25A37	ENSSHAP00000004487	ENSSHAP00000018570	ATP binding cassette subfamily B member 7.	Solute carrier family 25 member 37; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.507
ABCB7	SLC25A38	ENSSHAP00000004487	ENSSHAP00000007138	ATP binding cassette subfamily B member 7.	Solute carrier family 25 member 38; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.538
ABCB8	ABCB7	ENSSHAP00000010944	ENSSHAP00000004487	ATP binding cassette subfamily B member 8.	ATP binding cassette subfamily B member 7.	0.662
ABCB8	CCDC51	ENSSHAP00000010944	ENSSHAP00000019217	ATP binding cassette subfamily B member 8.	Uncharacterized protein.	0.602
ABCB8	SLC25A28	ENSSHAP00000010944	ENSSHAP00000014992	ATP binding cassette subfamily B member 8.	Solute carrier family 25 member 28; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.445
AIFM1	TST	ENSSHAP00000018848	ENSSHAP00000016356	Apoptosis inducing factor mitochondria associated 1.	Sulfurtransferase.	0.417
C3orf18	GRPEL1	ENSSHAP00000022362	ENSSHAP00000008855	Chromosome 3 open reading frame 18.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.550
C3orf18	GRPEL2	ENSSHAP00000022362	ENSSHAP00000010864	Chromosome 3 open reading frame 18.	GrpE like 2, mitochondrial; Belongs to the GrpE family.	0.550
C3orf18	PAM16	ENSSHAP00000022362	ENSSHAP00000012749	Chromosome 3 open reading frame 18.	Presequence translocase associated motor 16.	0.901
C3orf18	TIMM17B	ENSSHAP00000022362	ENSSHAP00000001743	Chromosome 3 open reading frame 18.	Mitochondrial import inner membrane translocase subunit TIM17; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.733
C3orf18	TIMM21	ENSSHAP00000022362	ENSSHAP00000005011	Chromosome 3 open reading frame 18.	Translocase of inner mitochondrial membrane 21.	0.613
C3orf18	TIMM23B	ENSSHAP00000022362	ENSSHAP00000008286	Chromosome 3 open reading frame 18.	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.755
C3orf18	TIMM44	ENSSHAP00000022362	ENSSHAP00000009921	Chromosome 3 open reading frame 18.	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	0.781
CCDC51	ABCB8	ENSSHAP00000019217	ENSSHAP00000010944	Uncharacterized protein.	ATP binding cassette subfamily B member 8.	0.602
CHCHD4	G3X158_SARHA	ENSSHAP00000003846	ENSSHAP00000021413	Coiled-coil-helix-coiled-coil-helix domain containing 4.	Uncharacterized protein.	0.402
CHCHD4	GRPEL1	ENSSHAP00000003846	ENSSHAP00000008855	Coiled-coil-helix-coiled-coil-helix domain containing 4.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.417
CHCHD4	GRPEL2	ENSSHAP00000003846	ENSSHAP00000010864	Coiled-coil-helix-coiled-coil-helix domain containing 4.	GrpE like 2, mitochondrial; Belongs to the GrpE family.	0.401
CHCHD4	LOC100928420	ENSSHAP00000003846	ENSSHAP00000000316	Coiled-coil-helix-coiled-coil-helix domain containing 4.	Uncharacterized protein.	0.458