STRINGSTRING
COL11A2 COL11A2 COL2A1 COL2A1 COL1A2 COL1A2 LUM LUM COL3A1 COL3A1 COL11A1 COL11A1 COL5A2 COL5A2 C1QTNF7 C1QTNF7 C1QTNF2 C1QTNF2 COL4A2 COL4A2 COL5A3 COL5A3 COL16A1 COL16A1 COL1A1 COL1A1 OTOL1 OTOL1 COL5A1 COL5A1 COL10A1 COL10A1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
COL11A2Collagen type XI alpha 2 chain. (1801 aa)
COL2A1Collagen type II alpha 1 chain. (1491 aa)
COL1A2Collagen type I alpha 2 chain. (1332 aa)
LUMLumican. (341 aa)
COL3A1Collagen type III alpha 1 chain. (1464 aa)
COL11A1Collagen type XI alpha 1 chain. (1549 aa)
COL5A2Collagen type V alpha 2 chain. (1500 aa)
C1QTNF7C1q and TNF related 7. (299 aa)
C1QTNF2C1q and TNF related 2. (289 aa)
COL4A2Collagen type IV alpha 2 chain. (1732 aa)
COL5A3Collagen type V alpha 3 chain. (1812 aa)
COL16A1Collagen type XVI alpha 1 chain. (1614 aa)
COL1A1Collagen type I alpha 1 chain. (1475 aa)
OTOL1Otolin 1. (474 aa)
COL5A1Collagen type V alpha 1 chain. (1810 aa)
COL10A1C1q domain-containing protein. (679 aa)
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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