(7 nodes) MATH/TRAF domain network (Sarcophilus harrisii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TRAF3	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (567 aa)
	TRAF1	TNF receptor-associated factor. (423 aa)
	MEP1A	Meprin A subunit. (719 aa)
	TRAF5	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (579 aa)
	LOC100920095	Meprin A subunit. (708 aa)
	USP7	Ubiquitin specific peptidase 7; Belongs to the peptidase C19 family. (1075 aa)
	TRAF2	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (523 aa)

Your Current Organism:

Sarcophilus harrisii

NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100920095	MEP1A	ENSSHAP00000008362	ENSSHAP00000020307	Meprin A subunit.	Meprin A subunit.	0.912
MEP1A	LOC100920095	ENSSHAP00000020307	ENSSHAP00000008362	Meprin A subunit.	Meprin A subunit.	0.912
TRAF1	TRAF3	ENSSHAP00000020527	ENSSHAP00000010648	TNF receptor-associated factor.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.705
TRAF1	TRAF5	ENSSHAP00000020527	ENSSHAP00000016798	TNF receptor-associated factor.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.677
TRAF2	TRAF3	ENSSHAP00000008747	ENSSHAP00000010648	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.969
TRAF2	TRAF5	ENSSHAP00000008747	ENSSHAP00000016798	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.966
TRAF3	TRAF1	ENSSHAP00000010648	ENSSHAP00000020527	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor.	0.705
TRAF3	TRAF2	ENSSHAP00000010648	ENSSHAP00000008747	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.969
TRAF3	TRAF5	ENSSHAP00000010648	ENSSHAP00000016798	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.973
TRAF5	TRAF1	ENSSHAP00000016798	ENSSHAP00000020527	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor.	0.677
TRAF5	TRAF2	ENSSHAP00000016798	ENSSHAP00000008747	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.966
TRAF5	TRAF3	ENSSHAP00000016798	ENSSHAP00000010648	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.973