STRINGSTRING
CDK7 CDK7 G3VC18_SARHA G3VC18_SARHA TAF1B TAF1B ZNRD1 ZNRD1 ERCC2 ERCC2 LOC100934072 LOC100934072 G3VK35_SARHA G3VK35_SARHA TAF1D TAF1D POLR2H POLR2H POLR2K POLR2K ERCC3 ERCC3 TAF1A TAF1A POLR2E POLR2E POLR2F POLR2F TBPL2 TBPL2 G3X322_SARHA G3X322_SARHA POLR1B POLR1B CCNH CCNH MNAT1 MNAT1 POLR1E POLR1E GTF2H1 GTF2H1 GTF2H3 GTF2H3 TBP TBP UBTF UBTF POLR1A POLR1A CAVIN1 CAVIN1 POLR1C POLR1C G3WH73_SARHA G3WH73_SARHA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (290 aa)
G3VC18_SARHAUncharacterized protein. (274 aa)
TAF1BTATA-box binding protein associated factor, RNA polymerase I subunit B. (588 aa)
ZNRD1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (132 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (661 aa)
LOC100934072General transcription factor IIH subunit. (397 aa)
G3VK35_SARHAUncharacterized protein. (349 aa)
TAF1DUncharacterized protein. (243 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (138 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (783 aa)
TAF1ATATA-box binding protein associated factor, RNA polymerase I subunit A. (451 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
TBPL2Uncharacterized protein. (183 aa)
G3X322_SARHAMyb-like domain-containing protein. (893 aa)
POLR1BUncharacterized protein. (353 aa)
CCNHCyclin H; Belongs to the cyclin family. (323 aa)
MNAT1MAT1 domain-containing protein. (178 aa)
POLR1ERNA polymerase I subunit E. (359 aa)
GTF2H1Uncharacterized protein. (549 aa)
GTF2H3General transcription factor IIH subunit 3. (309 aa)
TBPTATA-box binding protein. (308 aa)
UBTFUpstream binding transcription factor. (763 aa)
POLR1ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1723 aa)
CAVIN1Caveolae associated protein 1. (387 aa)
POLR1CRNA polymerase I and III subunit C. (339 aa)
G3WH73_SARHAUncharacterized protein. (860 aa)
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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