STRINGSTRING
G3VC18_SARHA G3VC18_SARHA LOC100916825-2 LOC100916825-2 LOC100934072 LOC100934072 LOC100913692 LOC100913692 LOC100913958 LOC100913958 G3VIL4_SARHA G3VIL4_SARHA ERCC2 ERCC2 LOC100916825 LOC100916825 G3VG33_SARHA G3VG33_SARHA G3VFZ7_SARHA G3VFZ7_SARHA MTA1 MTA1 RBBP7 RBBP7 ZNRD1 ZNRD1 TAF1B TAF1B G3VA09_SARHA G3VA09_SARHA RRN3 RRN3 ERCC6 ERCC6 H4C6 H4C6 LOC100916825-6 LOC100916825-6 G3X353_SARHA G3X353_SARHA G3X322_SARHA G3X322_SARHA CHD5 CHD5 DMTF1 DMTF1 G3X1I3_SARHA G3X1I3_SARHA CBX3 CBX3 H2AZ2 H2AZ2 POLR1B POLR1B CCNH CCNH MNAT1 MNAT1 POLR1E POLR1E GTF2H1 GTF2H1 GTF2H3 GTF2H3 TBP TBP G3WSU8_SARHA G3WSU8_SARHA UBTF UBTF C3H11orf88 C3H11orf88 G3WQR9_SARHA G3WQR9_SARHA G3WQQ3_SARHA G3WQQ3_SARHA POLR1A POLR1A CAVIN1 CAVIN1 POLR1C POLR1C CHD3 CHD3 MBD3 MBD3 GATAD2A GATAD2A G3WH73_SARHA G3WH73_SARHA HDAC2 HDAC2 GATAD2B GATAD2B RBBP4 RBBP4 POLR2E POLR2E HDAC1 HDAC1 MTA3 MTA3 TBPL2 TBPL2 G3W5G3_SARHA G3W5G3_SARHA G3W3U3_SARHA G3W3U3_SARHA POLR2F POLR2F CDK7 CDK7 EHMT2 EHMT2 TAF1A TAF1A ERCC3 ERCC3 POLR2K POLR2K POLR2H POLR2H G3VUR2_SARHA G3VUR2_SARHA TBPL1 TBPL1 G3VUC4_SARHA G3VUC4_SARHA TAF1D TAF1D G3VU23_SARHA G3VU23_SARHA G3VT75_SARHA G3VT75_SARHA MBD2 MBD2 LOC100916825-5 LOC100916825-5 G3VNX4_SARHA G3VNX4_SARHA LOC100928127 LOC100928127 G3VNC3_SARHA G3VNC3_SARHA LOC100929673 LOC100929673 G3VMC2_SARHA G3VMC2_SARHA MTA2 MTA2 LOC100916825-4 LOC100916825-4 LOC100916825-3 LOC100916825-3 G3VK35_SARHA G3VK35_SARHA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
G3VC18_SARHAUncharacterized protein. (274 aa)
LOC100916825-2Histone H4. (103 aa)
LOC100934072General transcription factor IIH subunit. (397 aa)
LOC100913692Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC100913958Histone H2B; Belongs to the histone H2B family. (126 aa)
G3VIL4_SARHAHistone H2B; Belongs to the histone H2B family. (134 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (661 aa)
LOC100916825Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
G3VG33_SARHAHist_deacetyl domain-containing protein. (330 aa)
G3VFZ7_SARHAHistone H2B; Belongs to the histone H2B family. (134 aa)
MTA1Metastasis associated 1. (650 aa)
RBBP7RB binding protein 7, chromatin remodeling factor. (425 aa)
ZNRD1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (132 aa)
TAF1BTATA-box binding protein associated factor, RNA polymerase I subunit B. (588 aa)
G3VA09_SARHAHistone H2B; Belongs to the histone H2B family. (135 aa)
RRN3RRN3 homolog, RNA polymerase I transcription factor. (556 aa)
ERCC6ERCC excision repair 6, chromatin remodeling factor. (1474 aa)
H4C6Histone H4. (103 aa)
LOC100916825-6Histone H4. (103 aa)
G3X353_SARHAWD_REPEATS_REGION domain-containing protein. (343 aa)
G3X322_SARHAMyb-like domain-containing protein. (893 aa)
CHD5Chromodomain helicase DNA binding protein 5. (1828 aa)
DMTF1Cyclin D binding myb like transcription factor 1. (760 aa)
G3X1I3_SARHACHDCT2 domain-containing protein. (339 aa)
CBX3Chromobox 3. (183 aa)
H2AZ2Histone H2A; Belongs to the histone H2A family. (128 aa)
POLR1BUncharacterized protein. (353 aa)
CCNHCyclin H; Belongs to the cyclin family. (323 aa)
MNAT1MAT1 domain-containing protein. (178 aa)
POLR1ERNA polymerase I subunit E. (359 aa)
GTF2H1Uncharacterized protein. (549 aa)
GTF2H3General transcription factor IIH subunit 3. (309 aa)
TBPTATA-box binding protein. (308 aa)
G3WSU8_SARHAUncharacterized protein. (200 aa)
UBTFUpstream binding transcription factor. (763 aa)
C3H11orf88Uncharacterized protein. (140 aa)
G3WQR9_SARHAUncharacterized protein. (189 aa)
G3WQQ3_SARHAUncharacterized protein. (1807 aa)
POLR1ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1723 aa)
CAVIN1Caveolae associated protein 1. (387 aa)
POLR1CRNA polymerase I and III subunit C. (339 aa)
CHD3Chromodomain helicase DNA binding protein 3. (1917 aa)
MBD3MBD domain-containing protein. (257 aa)
GATAD2AGATA zinc finger domain containing 2A. (601 aa)
G3WH73_SARHAUncharacterized protein. (860 aa)
HDAC2Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (473 aa)
GATAD2BGATA zinc finger domain containing 2B. (594 aa)
RBBP4WD_REPEATS_REGION domain-containing protein. (420 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
HDAC1Hist_deacetyl domain-containing protein. (323 aa)
MTA3Metastasis associated 1 family member 3. (538 aa)
TBPL2Uncharacterized protein. (183 aa)
G3W5G3_SARHASprT-like domain-containing protein. (187 aa)
G3W3U3_SARHAUncharacterized protein. (200 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (290 aa)
EHMT2Euchromatic histone lysine methyltransferase 2. (1280 aa)
TAF1ATATA-box binding protein associated factor, RNA polymerase I subunit A. (451 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (783 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (138 aa)
G3VUR2_SARHAHistone domain-containing protein; Belongs to the histone H2B family. (127 aa)
TBPL1TATA-box binding protein like 1. (186 aa)
G3VUC4_SARHAHistone H2A; Belongs to the histone H2A family. (108 aa)
TAF1DUncharacterized protein. (243 aa)
G3VU23_SARHAHist_deacetyl domain-containing protein. (260 aa)
G3VT75_SARHAHistone H2B; Belongs to the histone H2B family. (134 aa)
MBD2Uncharacterized protein. (202 aa)
LOC100916825-5Histone H4. (103 aa)
G3VNX4_SARHAUncharacterized protein. (129 aa)
LOC100928127Histone H2B; Belongs to the histone H2B family. (126 aa)
G3VNC3_SARHAUncharacterized protein. (443 aa)
LOC100929673Histone H2B; Belongs to the histone H2B family. (126 aa)
G3VMC2_SARHAUncharacterized protein. (544 aa)
MTA2Metastasis associated 1 family member 2. (621 aa)
LOC100916825-4Histone H4. (103 aa)
LOC100916825-3Histone H4. (103 aa)
G3VK35_SARHAUncharacterized protein. (349 aa)
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.