(19 nodes) Protein export network (Sarcophilus harrisii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SEC62	SEC62 homolog, preprotein translocation factor. (408 aa)
	SRP72	Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family. (674 aa)
	SRP54	Signal recognition particle 54. (343 aa)
	G3VNA1_SARHA	Mitochondrial inner membrane protease subunit. (177 aa)
	SPCS2	Signal peptidase complex subunit 2. (189 aa)
	HSPA5	Heat shock protein family A (Hsp70) member 5; Belongs to the heat shock protein 70 family. (656 aa)
	SRPRA	SRP receptor subunit alpha. (601 aa)
	SEC61A2	SEC61 translocon alpha 2 subunit. (476 aa)
	SRP19	Uncharacterized protein. (78 aa)
	SRP14	Signal recognition particle 14. (77 aa)
	OXA1L	OXA1L mitochondrial inner membrane protein. (442 aa)
	SEC61G	SEC61 translocon gamma subunit. (66 aa)
	SEC11C	Signal peptidase complex catalytic subunit SEC11. (177 aa)
	SRP9	Signal recognition particle 9 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding. (86 aa)
	SEC61A1	SEC61 translocon alpha 1 subunit. (482 aa)
	SPCS3	Signal peptidase complex subunit 3. (132 aa)
	IMMP1L	Mitochondrial inner membrane protease subunit. (166 aa)
	SEC11A	Signal peptidase complex catalytic subunit SEC11. (179 aa)
	SEC63	SEC63 homolog, protein translocation regulator. (737 aa)

Your Current Organism:

Sarcophilus harrisii

NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3VNA1_SARHA	IMMP1L	ENSSHAP00000004656	ENSSHAP00000018146	Mitochondrial inner membrane protease subunit.	Mitochondrial inner membrane protease subunit.	0.441
G3VNA1_SARHA	OXA1L	ENSSHAP00000004656	ENSSHAP00000014248	Mitochondrial inner membrane protease subunit.	OXA1L mitochondrial inner membrane protein.	0.486
G3VNA1_SARHA	SPCS2	ENSSHAP00000004656	ENSSHAP00000006192	Mitochondrial inner membrane protease subunit.	Signal peptidase complex subunit 2.	0.755
G3VNA1_SARHA	SPCS3	ENSSHAP00000004656	ENSSHAP00000017679	Mitochondrial inner membrane protease subunit.	Signal peptidase complex subunit 3.	0.757
HSPA5	SEC61A1	ENSSHAP00000010333	ENSSHAP00000016352	Heat shock protein family A (Hsp70) member 5; Belongs to the heat shock protein 70 family.	SEC61 translocon alpha 1 subunit.	0.722
HSPA5	SEC61A2	ENSSHAP00000010333	ENSSHAP00000010638	Heat shock protein family A (Hsp70) member 5; Belongs to the heat shock protein 70 family.	SEC61 translocon alpha 2 subunit.	0.722
HSPA5	SEC61G	ENSSHAP00000010333	ENSSHAP00000014603	Heat shock protein family A (Hsp70) member 5; Belongs to the heat shock protein 70 family.	SEC61 translocon gamma subunit.	0.446
HSPA5	SEC62	ENSSHAP00000010333	ENSSHAP00000000106	Heat shock protein family A (Hsp70) member 5; Belongs to the heat shock protein 70 family.	SEC62 homolog, preprotein translocation factor.	0.676
HSPA5	SEC63	ENSSHAP00000010333	ENSSHAP00000020647	Heat shock protein family A (Hsp70) member 5; Belongs to the heat shock protein 70 family.	SEC63 homolog, protein translocation regulator.	0.956
HSPA5	SPCS2	ENSSHAP00000010333	ENSSHAP00000006192	Heat shock protein family A (Hsp70) member 5; Belongs to the heat shock protein 70 family.	Signal peptidase complex subunit 2.	0.730
HSPA5	SRP19	ENSSHAP00000010333	ENSSHAP00000010967	Heat shock protein family A (Hsp70) member 5; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.567
HSPA5	SRP54	ENSSHAP00000010333	ENSSHAP00000000752	Heat shock protein family A (Hsp70) member 5; Belongs to the heat shock protein 70 family.	Signal recognition particle 54.	0.580
IMMP1L	G3VNA1_SARHA	ENSSHAP00000018146	ENSSHAP00000004656	Mitochondrial inner membrane protease subunit.	Mitochondrial inner membrane protease subunit.	0.441
IMMP1L	OXA1L	ENSSHAP00000018146	ENSSHAP00000014248	Mitochondrial inner membrane protease subunit.	OXA1L mitochondrial inner membrane protein.	0.470
IMMP1L	SPCS2	ENSSHAP00000018146	ENSSHAP00000006192	Mitochondrial inner membrane protease subunit.	Signal peptidase complex subunit 2.	0.755
IMMP1L	SPCS3	ENSSHAP00000018146	ENSSHAP00000017679	Mitochondrial inner membrane protease subunit.	Signal peptidase complex subunit 3.	0.757
OXA1L	G3VNA1_SARHA	ENSSHAP00000014248	ENSSHAP00000004656	OXA1L mitochondrial inner membrane protein.	Mitochondrial inner membrane protease subunit.	0.486
OXA1L	IMMP1L	ENSSHAP00000014248	ENSSHAP00000018146	OXA1L mitochondrial inner membrane protein.	Mitochondrial inner membrane protease subunit.	0.470
OXA1L	SEC11A	ENSSHAP00000014248	ENSSHAP00000018927	OXA1L mitochondrial inner membrane protein.	Signal peptidase complex catalytic subunit SEC11.	0.416
OXA1L	SEC11C	ENSSHAP00000014248	ENSSHAP00000015590	OXA1L mitochondrial inner membrane protein.	Signal peptidase complex catalytic subunit SEC11.	0.416