Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABD29345.1 | ABD29346.1 | SAOUHSC_00167 | SAOUHSC_00168 | Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. | Conserved hypothetical protein. | 0.936 |
| ABD29345.1 | ABD29347.1 | SAOUHSC_00167 | SAOUHSC_00169 | Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. | Peptide ABC transporter, permease protein, putative. | 0.996 |
| ABD29345.1 | ABD29348.1 | SAOUHSC_00167 | SAOUHSC_00170 | Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. | Conserved hypothetical protein. | 0.882 |
| ABD29345.1 | ABD30048.1 | SAOUHSC_00167 | SAOUHSC_00923 | Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. | Conserved hypothetical protein. | 0.812 |
| ABD29345.1 | ABD30049.1 | SAOUHSC_00167 | SAOUHSC_00924 | Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. | Conserved hypothetical protein. | 0.846 |
| ABD29345.1 | ABD30050.1 | SAOUHSC_00167 | SAOUHSC_00925 | Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. | Conserved hypothetical protein; Belongs to the ABC transporter superfamily. | 0.547 |
| ABD29345.1 | ABD30052.1 | SAOUHSC_00167 | SAOUHSC_00927 | Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. | Oligopeptide ABC transporter, substrate-binding protein, putative. | 0.559 |
| ABD29345.1 | ABD30054.1 | SAOUHSC_00167 | SAOUHSC_00929 | Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. | Oligopeptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. | 0.538 |
| ABD29345.1 | ABD30055.1 | SAOUHSC_00167 | SAOUHSC_00930 | Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. | Oligopeptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. | 0.556 |
| ABD29345.1 | ABD30056.1 | SAOUHSC_00167 | SAOUHSC_00931 | Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. | Oligopeptide ABC transporter, permease protein, putative. | 0.823 |
| ABD29345.1 | ABD30057.1 | SAOUHSC_00167 | SAOUHSC_00932 | Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. | Oligopeptide ABC transporter, permease protein, putative. | 0.938 |
| ABD29345.1 | cntA | SAOUHSC_00167 | SAOUHSC_02767 | Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. | Peptide ABC transporter, peptide-binding protein, putative; Part of the ABC transporter complex CntABCDF (Opp1) involved in the uptake of metal in complex with the metallophore staphylopine (StP). Involved in the import of divalent metals ions such as nickel, cobalt and zinc. Binds the metal via the metallophore StP, and transfers the StP-metal complex to the membrane-bound permease. Binds one molecule of StP/metal. Binds StP/Co(2+) and StP/Ni(2+) tighter than StP/Zn(2+). Plays a major role in nickel/cobalt import in zinc- depleted conditions. Contributes to virulence. Required for ful [...] | 0.520 |
| ABD29345.1 | cntB | SAOUHSC_00167 | SAOUHSC_02766 | Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. | Peptide ABC transporter, permease protein, putative; Part of the ABC transporter complex CntABCDF (Opp1) involved in the uptake of metal in complex with the metallophore staphylopine (StP). Involved in the import of divalent metals ions such as nickel, cobalt and zinc. Probably responsible for the translocation of the substrate across the membrane. Plays a major role in nickel/cobalt import in zinc-depleted conditions. Contributes to virulence. Required for full urease activity in vitro ; Belongs to the binding-protein-dependent transport system permease family. | 0.838 |
| ABD29345.1 | cntC | SAOUHSC_00167 | SAOUHSC_02765 | Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. | Nickel ABC transporter, permease protein, putative; Part of the ABC transporter complex CntABCDF (Opp1) involved in the uptake of metal in complex with the metallophore staphylopine (StP). Involved in the import of divalent metals ions such as nickel, cobalt and zinc. Probably responsible for the translocation of the substrate across the membrane. Plays a major role in nickel/cobalt import in zinc-depleted conditions. Contributes to virulence. Required for full urease activity in vitro ; Belongs to the binding-protein-dependent transport system permease family. | 0.927 |
| ABD29345.1 | cntD | SAOUHSC_00167 | SAOUHSC_02764 | Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. | Peptide ABC transporter, ATP-binding protein, putative; Part of the ABC transporter complex CntABCDF (Opp1) involved in the uptake of metal in complex with the metallophore staphylopine (StP). Involved in the import of divalent metals ions such as nickel, cobalt and zinc. Probably responsible for energy coupling to the transport system. Plays a major role in nickel/cobalt import in zinc-depleted conditions. Contributes to virulence. Required for full urease activity in vitro. | 0.545 |
| ABD29345.1 | nikB | SAOUHSC_00167 | SAOUHSC_01380 | Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. | Oligopeptide transporter putative membrane permease domain; Part of the ABC transporter complex NikABCDE (Opp2) involved in nickel import. Probably responsible for the translocation of the substrate across the membrane. Required for full urease activity and plays a significant role in the virulence of S.aureus during urinary tract infection (UTI). | 0.838 |
| ABD29345.1 | nikC | SAOUHSC_00167 | SAOUHSC_01379 | Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. | Oligopeptide transporter putative membrane permease domain; Part of the ABC transporter complex NikABCDE (Opp2) involved in nickel import. Probably responsible for the translocation of the substrate across the membrane. Required for full urease activity and plays a significant role in the virulence of S.aureus during urinary tract infection (UTI). | 0.897 |
| ABD29345.1 | nikD | SAOUHSC_00167 | SAOUHSC_01378 | Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. | Peptide ABC transporter, ATP-binding protein, putative; Part of the ABC transporter complex NikABCDE (Opp2) involved in nickel import. Probably responsible for energy coupling to the transport system. Required for full urease activity and plays a significant role in the virulence of S.aureus during urinary tract infection (UTI). | 0.579 |
| ABD29346.1 | ABD29345.1 | SAOUHSC_00168 | SAOUHSC_00167 | Conserved hypothetical protein. | Peptide ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily. | 0.936 |
| ABD29346.1 | ABD29347.1 | SAOUHSC_00168 | SAOUHSC_00169 | Conserved hypothetical protein. | Peptide ABC transporter, permease protein, putative. | 0.942 |
page 1 of 27