Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABD29322.1 | ABD31054.1 | SAOUHSC_00142 | SAOUHSC_01998 | Formate dehydrogenase, NAD-dependent, putative; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | Conserved hypothetical protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.428 |
| ABD29322.1 | ABD31593.1 | SAOUHSC_00142 | SAOUHSC_02582 | Formate dehydrogenase, NAD-dependent, putative; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | Formate dehydrogenase, alpha subunit, putative; In the C-terminal section; belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.923 |
| ABD29474.1 | ABD30163.1 | SAOUHSC_00305 | SAOUHSC_01043 | Conserved hypothetical protein. | Dihydrolipoamide dehydrogenase. | 0.665 |
| ABD29474.1 | ABD30386.1 | SAOUHSC_00305 | SAOUHSC_01287 | Conserved hypothetical protein. | Glutamine synthetase, type I. | 0.578 |
| ABD29474.1 | ABD30693.1 | SAOUHSC_00305 | SAOUHSC_01614 | Conserved hypothetical protein. | Dihydrolipoamide dehydrogenase. | 0.665 |
| ABD29474.1 | gcvPA | SAOUHSC_00305 | SAOUHSC_01633 | Conserved hypothetical protein. | Glycine cleavage system P-protein subunit I, putative; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.897 |
| ABD29474.1 | gcvPB | SAOUHSC_00305 | SAOUHSC_01632 | Conserved hypothetical protein. | Glycine cleavage system P-protein subunit ll, putative; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily. | 0.898 |
| ABD29474.1 | gcvT | SAOUHSC_00305 | SAOUHSC_01634 | Conserved hypothetical protein. | Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.964 |
| ABD29474.1 | glyA | SAOUHSC_00305 | SAOUHSC_02354 | Conserved hypothetical protein. | Serine hydroxymethyltransferase, putative; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.820 |
| ABD29686.1 | ABD29702.1 | SAOUHSC_00538 | SAOUHSC_00555 | Haloacid dehalogenase-like hydrolase, putative. | Hydrolase, haloacid dehalogenase-like. | 0.918 |
| ABD29702.1 | ABD29686.1 | SAOUHSC_00555 | SAOUHSC_00538 | Hydrolase, haloacid dehalogenase-like. | Haloacid dehalogenase-like hydrolase, putative. | 0.918 |
| ABD29705.1 | ABD30870.1 | SAOUHSC_00558 | SAOUHSC_01802 | acetyl-CoA acetyltransferase, putative; Belongs to the thiolase-like superfamily. Thiolase family. | Conserved hypothetical protein; Belongs to the citrate synthase family. | 0.919 |
| ABD29705.1 | ABD30913.1 | SAOUHSC_00558 | SAOUHSC_01846 | acetyl-CoA acetyltransferase, putative; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA synthetase, putative. | 0.739 |
| ABD29705.1 | ABD31924.1 | SAOUHSC_00558 | SAOUHSC_02929 | acetyl-CoA acetyltransferase, putative; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA synthetase, putative. | 0.739 |
| ABD29723.1 | glyA | SAOUHSC_00581 | SAOUHSC_02354 | Conserved hypothetical protein. | Serine hydroxymethyltransferase, putative; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.404 |
| ABD29888.1 | ABD29991.1 | SAOUHSC_00756 | SAOUHSC_00866 | Conserved hypothetical protein. | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein. | 0.888 |
| ABD29888.1 | ABD31589.1 | SAOUHSC_00756 | SAOUHSC_02577 | Conserved hypothetical protein. | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein. | 0.888 |
| ABD29888.1 | ABD31731.1 | SAOUHSC_00756 | SAOUHSC_02723 | Conserved hypothetical protein. | Glycerate kinase, putative; Belongs to the glycerate kinase type-1 family. | 0.917 |
| ABD29961.1 | gcvH | SAOUHSC_00835 | SAOUHSC_00836 | Conserved hypothetical protein; Belongs to the ArsC family. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | 0.791 |
| ABD29991.1 | ABD29888.1 | SAOUHSC_00866 | SAOUHSC_00756 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein. | Conserved hypothetical protein. | 0.888 |
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