Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APR51498.1 | APR51503.1 | BRX40_02795 | BRX40_02820 | Cytochrome c oxidase subunit 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.999 |
| APR51498.1 | APR51713.1 | BRX40_02795 | BRX40_04015 | Cytochrome c oxidase subunit 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome c family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.734 |
| APR51498.1 | APR52260.1 | BRX40_02795 | BRX40_07295 | Cytochrome c oxidase subunit 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.905 |
| APR51498.1 | APR52665.1 | BRX40_02795 | BRX40_09710 | Cytochrome c oxidase subunit 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.637 |
| APR51498.1 | APR53065.1 | BRX40_02795 | BRX40_12070 | Cytochrome c oxidase subunit 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.682 |
| APR51498.1 | APR53872.1 | BRX40_02795 | BRX40_16960 | Cytochrome c oxidase subunit 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. | 0.999 |
| APR51498.1 | APR53873.1 | BRX40_02795 | BRX40_16965 | Cytochrome c oxidase subunit 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome c oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| APR51498.1 | APR53874.1 | BRX40_02795 | BRX40_16970 | Cytochrome c oxidase subunit 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.786 |
| APR51498.1 | APR54464.1 | BRX40_02795 | BRX40_20380 | Cytochrome c oxidase subunit 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome c1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.819 |
| APR51498.1 | APR54465.1 | BRX40_02795 | BRX40_20385 | Cytochrome c oxidase subunit 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.996 |
| APR51498.1 | ctaB | BRX40_02795 | BRX40_02805 | Cytochrome c oxidase subunit 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.998 |
| APR51498.1 | ctaD | BRX40_02795 | BRX40_02815 | Cytochrome c oxidase subunit 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.999 |
| APR51498.1 | cyoB | BRX40_02795 | BRX40_07290 | Cytochrome c oxidase subunit 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ubiquinol oxidase subunit II; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. | 0.998 |
| APR51498.1 | cyoD | BRX40_02795 | BRX40_07300 | Cytochrome c oxidase subunit 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome o ubiquinol oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| APR51498.1 | petA | BRX40_02795 | BRX40_20390 | Cytochrome c oxidase subunit 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.985 |
| APR51503.1 | APR51498.1 | BRX40_02820 | BRX40_02795 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase subunit 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| APR51503.1 | APR51713.1 | BRX40_02820 | BRX40_04015 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.798 |
| APR51503.1 | APR52260.1 | BRX40_02820 | BRX40_07295 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| APR51503.1 | APR52665.1 | BRX40_02820 | BRX40_09710 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.651 |
| APR51503.1 | APR53065.1 | BRX40_02820 | BRX40_12070 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.769 |
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