STRINGSTRING
APR54629.1 APR54629.1 APR54464.1 APR54464.1 APR53874.1 APR53874.1 APR53873.1 APR53873.1 APR53065.1 APR53065.1 APR53875.1 APR53875.1 APR51713.1 APR51713.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APR54629.1Iron permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (660 aa)
APR54464.1Cytochrome c1; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
APR53874.1Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)
APR53873.1Cytochrome c oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
APR53065.1Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)
APR53875.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
APR51713.1Cytochrome c family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
Your Current Organism:
Sphingomonas koreensis
NCBI taxonomy Id: 93064
Other names: DSM 15582, IFO 16723, JCM 11456, KCCM 41069, KCTC 2882, NBRC 16723, S. koreensis, Sphingomonas koreensis Lee et al. 2001, Sphingomonas sp. ABOJT, Sphingomonas sp. ABOJU, Sphingomonas sp. ABOJV, Sphingomonas sp. JSS-26, Sphingomonas sp. JSS-28, Sphingomonas sp. JSS26, Sphingomonas sp. JSS28, strain JSS26
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