15 items (Eremothecium cymbalariae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G8JR19_ERECY	Protein-serine/threonine kinase. (508 aa)
	I6NDZ2_ERECY	Ubiquitin carboxyl-terminal hydrolase. (834 aa)
	I6NCM7_ERECY	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (659 aa)
	G8JX57_ERECY	Uncharacterized protein; Belongs to the peptidase C19 family. (1264 aa)
	G8JX42_ERECY	Uncharacterized protein. (133 aa)
	G8JX11_ERECY	WD_REPEATS_REGION domain-containing protein. (716 aa)
	G8JVJ9_ERECY	NTF2 domain-containing protein. (480 aa)
	G8JUU3_ERECY	LsmAD domain-containing protein. (693 aa)
	G8JUH0_ERECY	Adenylyl cyclase-associated protein; Belongs to the CAP family. (527 aa)
	G8JU48_ERECY	USP domain-containing protein; Belongs to the peptidase C19 family. (1246 aa)
	G8JTW6_ERECY	Rhomboid domain-containing protein. (337 aa)
	G8JTT0_ERECY	Protein-serine/threonine kinase. (443 aa)
	G8JTM9_ERECY	Mitochondrial fission 1 protein; Has a role in mitochondrial fission. (155 aa)
	G8JRC0_ERECY	Uncharacterized protein. (217 aa)
	G8JNF7_ERECY	Uncharacterized protein. (1113 aa)

Your Current Organism:

Eremothecium cymbalariae

NCBI taxonomy Id: 931890
Other names: E. cymbalariae DBVPG#7215, Eremothecium cymbalariae DBVPG#7215

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G8JNF7_ERECY	G8JX11_ERECY	G8JNF7	G8JX11	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.717
G8JR19_ERECY	G8JTT0_ERECY	G8JR19	G8JTT0	Protein-serine/threonine kinase.	Protein-serine/threonine kinase.	0.456
G8JTM9_ERECY	G8JTW6_ERECY	G8JTM9	G8JTW6	Mitochondrial fission 1 protein; Has a role in mitochondrial fission.	Rhomboid domain-containing protein.	0.429
G8JTM9_ERECY	G8JX11_ERECY	G8JTM9	G8JX11	Mitochondrial fission 1 protein; Has a role in mitochondrial fission.	WD_REPEATS_REGION domain-containing protein.	0.862
G8JTM9_ERECY	I6NCM7_ERECY	G8JTM9	I6NCM7	Mitochondrial fission 1 protein; Has a role in mitochondrial fission.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.638
G8JTT0_ERECY	G8JR19_ERECY	G8JTT0	G8JR19	Protein-serine/threonine kinase.	Protein-serine/threonine kinase.	0.456
G8JTW6_ERECY	G8JTM9_ERECY	G8JTW6	G8JTM9	Rhomboid domain-containing protein.	Mitochondrial fission 1 protein; Has a role in mitochondrial fission.	0.429
G8JU48_ERECY	G8JX57_ERECY	G8JU48	G8JX57	USP domain-containing protein; Belongs to the peptidase C19 family.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.605
G8JU48_ERECY	I6NDZ2_ERECY	G8JU48	I6NDZ2	USP domain-containing protein; Belongs to the peptidase C19 family.	Ubiquitin carboxyl-terminal hydrolase.	0.576
G8JUU3_ERECY	G8JVJ9_ERECY	G8JUU3	G8JVJ9	LsmAD domain-containing protein.	NTF2 domain-containing protein.	0.542
G8JVJ9_ERECY	G8JUU3_ERECY	G8JVJ9	G8JUU3	NTF2 domain-containing protein.	LsmAD domain-containing protein.	0.542
G8JVJ9_ERECY	I6NDZ2_ERECY	G8JVJ9	I6NDZ2	NTF2 domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.994
G8JX11_ERECY	G8JNF7_ERECY	G8JX11	G8JNF7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.717
G8JX11_ERECY	G8JTM9_ERECY	G8JX11	G8JTM9	WD_REPEATS_REGION domain-containing protein.	Mitochondrial fission 1 protein; Has a role in mitochondrial fission.	0.862
G8JX57_ERECY	G8JU48_ERECY	G8JX57	G8JU48	Uncharacterized protein; Belongs to the peptidase C19 family.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.605
G8JX57_ERECY	I6NDZ2_ERECY	G8JX57	I6NDZ2	Uncharacterized protein; Belongs to the peptidase C19 family.	Ubiquitin carboxyl-terminal hydrolase.	0.722
I6NCM7_ERECY	G8JTM9_ERECY	I6NCM7	G8JTM9	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	Mitochondrial fission 1 protein; Has a role in mitochondrial fission.	0.638
I6NDZ2_ERECY	G8JU48_ERECY	I6NDZ2	G8JU48	Ubiquitin carboxyl-terminal hydrolase.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.576
I6NDZ2_ERECY	G8JVJ9_ERECY	I6NDZ2	G8JVJ9	Ubiquitin carboxyl-terminal hydrolase.	NTF2 domain-containing protein.	0.994
I6NDZ2_ERECY	G8JX57_ERECY	I6NDZ2	G8JX57	Ubiquitin carboxyl-terminal hydrolase.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.722