12 items (Eremothecium cymbalariae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G8JN43_ERECY	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (439 aa)
	G8JNE9_ERECY	Uncharacterized protein. (395 aa)
	G8JQ27_ERECY	AAA domain-containing protein. (319 aa)
	G8JQM7_ERECY	AAA domain-containing protein. (332 aa)
	I6NDM1_ERECY	DNA polymerase. (1475 aa)
	G8JR84_ERECY	AAA domain-containing protein. (350 aa)
	G8JXM6_ERECY	Replication factor C subunit 1. (806 aa)
	G8JWR2_ERECY	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (259 aa)
	G8JWQ6_ERECY	AAA domain-containing protein. (356 aa)
	G8JS92_ERECY	DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (509 aa)
	G8JU85_ERECY	ATPase_AAA_core domain-containing protein. (802 aa)
	G8JWQ3_ERECY	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (652 aa)

Your Current Organism:

Eremothecium cymbalariae

NCBI taxonomy Id: 931890
Other names: E. cymbalariae DBVPG#7215, Eremothecium cymbalariae DBVPG#7215

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G8JN43_ERECY	G8JQ27_ERECY	G8JN43	G8JQ27	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	AAA domain-containing protein.	0.839
G8JN43_ERECY	G8JQM7_ERECY	G8JN43	G8JQM7	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	AAA domain-containing protein.	0.802
G8JN43_ERECY	G8JR84_ERECY	G8JN43	G8JR84	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	AAA domain-containing protein.	0.951
G8JN43_ERECY	G8JS92_ERECY	G8JN43	G8JS92	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.	0.999
G8JN43_ERECY	G8JU85_ERECY	G8JN43	G8JU85	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	ATPase_AAA_core domain-containing protein.	0.757
G8JN43_ERECY	G8JWQ3_ERECY	G8JN43	G8JWQ3	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.	0.998
G8JN43_ERECY	G8JWQ6_ERECY	G8JN43	G8JWQ6	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	AAA domain-containing protein.	0.857
G8JN43_ERECY	G8JWR2_ERECY	G8JN43	G8JWR2	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.945
G8JN43_ERECY	G8JXM6_ERECY	G8JN43	G8JXM6	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	Replication factor C subunit 1.	0.738
G8JN43_ERECY	I6NDM1_ERECY	G8JN43	I6NDM1	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	DNA polymerase.	0.998
G8JNE9_ERECY	G8JQ27_ERECY	G8JNE9	G8JQ27	Uncharacterized protein.	AAA domain-containing protein.	0.405
G8JNE9_ERECY	G8JQM7_ERECY	G8JNE9	G8JQM7	Uncharacterized protein.	AAA domain-containing protein.	0.401
G8JNE9_ERECY	G8JS92_ERECY	G8JNE9	G8JS92	Uncharacterized protein.	DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.	0.408
G8JNE9_ERECY	G8JU85_ERECY	G8JNE9	G8JU85	Uncharacterized protein.	ATPase_AAA_core domain-containing protein.	0.482
G8JNE9_ERECY	G8JWQ3_ERECY	G8JNE9	G8JWQ3	Uncharacterized protein.	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.	0.440
G8JNE9_ERECY	G8JWR2_ERECY	G8JNE9	G8JWR2	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.942
G8JNE9_ERECY	I6NDM1_ERECY	G8JNE9	I6NDM1	Uncharacterized protein.	DNA polymerase.	0.628
G8JQ27_ERECY	G8JN43_ERECY	G8JQ27	G8JN43	AAA domain-containing protein.	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	0.839
G8JQ27_ERECY	G8JNE9_ERECY	G8JQ27	G8JNE9	AAA domain-containing protein.	Uncharacterized protein.	0.405
G8JQ27_ERECY	G8JQM7_ERECY	G8JQ27	G8JQM7	AAA domain-containing protein.	AAA domain-containing protein.	0.999