STRINGSTRING
cysJ_2 cysJ_2 cysI cysI ANC43083.1 ANC43083.1 sir sir narT narT sseA sseA nrtA_2 nrtA_2 pdtaR pdtaR narB narB hcaC hcaC thcD_2 thcD_2 ascD ascD ndoA ndoA andAd andAd andAc_2 andAc_2 ndoR ndoR ppiC ppiC ANC44559.1 ANC44559.1 ANC44750.1 ANC44750.1 ophA1_1 ophA1_1 kshA_1 kshA_1 ANC45646.1 ANC45646.1 cysH cysH cysD cysD cysN cysN fpr_2 fpr_2 sbp sbp cysW_1 cysW_1 cysW_2 cysW_2 fpr_1 fpr_1 fadH fadH mphP mphP narK2 narK2 ppiD_1 ppiD_1 narI narI narJ narJ narH narH narZ narZ camA camA cysJ_1 cysJ_1 ANC46825.1 ANC46825.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cysJ_2Sulfite reductase [NADPH] flavoprotein alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component. (621 aa)
cysISulfite reductase; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (572 aa)
ANC43083.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
sirNitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (668 aa)
narTMFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (462 aa)
sseA3-mercaptopyruvate sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
nrtA_2Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (392 aa)
pdtaRHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (191 aa)
narBNitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (903 aa)
hcaCNitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (123 aa)
thcD_2Nitrite reductase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (820 aa)
ascDHypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
ndoANaphthalene 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa)
andAdSalicylate hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
andAc_2Salicylate hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa)
ndoRNaphthalene 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)
ppiCHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
ANC44559.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
ANC44750.1Ferredoxin:oxidoreductase FAD/NAD(P)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1151 aa)
ophA1_1Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
kshA_1Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)
ANC45646.1Salicylate hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
cysHPhosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. (238 aa)
cysDSulfate adenylyltransferase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
cysNSulfate adenylyltransferase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (433 aa)
fpr_2ferredoxin--NADP(+) reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
sbpSulfate transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
cysW_1Sulfate ABC transporter permease subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (287 aa)
cysW_2Sulfate ABC transporter permease subunit CysW; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
fpr_1ferredoxin--NADP(+) reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)
fadHNADPH-dependent 2,4-dienoyl-CoA reductase; Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (673 aa)
mphPCDP-6-deoxy-delta-3,4-glucoseen reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)
narK2MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)
ppiD_1Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)
narINitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
narJHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
narHWith NarGJI catalyzes the reduction of nitrate; the beta subunit is an iron sulfur cluster containing electron transfer subunit; one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high; Derived by automated computational analysis using gene prediction method: Protein Homology. (508 aa)
narZNitrate reductase subunit alpha; With NarYV catalyzes the reduction of nitrate; the beta subunit is an iron sulfur cluster containing electron transfer subunit; one of 3 nitrate reductases in E. coli; expression of nitrate reductase Z is not dependent on nitrate levels; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1253 aa)
camAPyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa)
cysJ_1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (587 aa)
ANC46825.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (298 aa)
Your Current Organism:
Pandoraea pnomenusa
NCBI taxonomy Id: 93220
Other names: ATCC BAA-63, ATCC:BAA:63, CCM 4978, CCUG 38742, CIP 106626, DSM 16536, LMG 18087, LMG:18087, NCTC 13160, P. pnomenusa, Pandoraea pnomenusa Coenye et al. 2000, Pandoraea sp. RB-44
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