STRINGSTRING
ANC43013.1 ANC43013.1 yhbO yhbO katA_1 katA_1 katA_2 katA_2 ANC46588.1 ANC46588.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ANC43013.1Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)
yhbOProtease; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)
katA_1Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the catalase family. (489 aa)
katA_2Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the catalase family. (482 aa)
ANC46588.1Catalase HPII; Derived by automated computational analysis using gene prediction method: Protein Homology. (809 aa)
Your Current Organism:
Pandoraea pnomenusa
NCBI taxonomy Id: 93220
Other names: ATCC BAA-63, ATCC:BAA:63, CCM 4978, CCUG 38742, CIP 106626, DSM 16536, LMG 18087, LMG:18087, NCTC 13160, P. pnomenusa, Pandoraea pnomenusa Coenye et al. 2000, Pandoraea sp. RB-44
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