STRINGSTRING
ANC43131.1 ANC43131.1 ghrA_1 ghrA_1 ANC46992.1 ANC46992.1 lldD lldD ANC47065.1 ANC47065.1 ANC43968.1 ANC43968.1 glcE glcE A6P55_07245 A6P55_07245 ghrB_1 ghrB_1 lutC lutC ANC47085.1 ANC47085.1 glcE-2 glcE-2 glcF glcF gph_1 gph_1 ghrA_2 ghrA_2 ghrB_3 ghrB_3 ANC45279.1 ANC45279.1 lutB_1 lutB_1 lutA_2 lutA_2 glcA glcA ghrB_4 ghrB_4 ANC45755.1 ANC45755.1 mdlB mdlB ANC45851.1 ANC45851.1 lutA_3 lutA_3 lutB_2 lutB_2 aceA aceA aceB aceB ANC46506.1 ANC46506.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ANC43131.1Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (473 aa)
ghrA_1Glyoxylate/hydroxypyruvate reductase A; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)
ANC46992.1Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1018 aa)
lldDAlpha-hydroxy-acid oxidizing enzyme; Flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)
ANC47065.12-hydroxy-acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (473 aa)
ANC43968.1Glycolate oxidase subunit GlcD; Derived by automated computational analysis using gene prediction method: Protein Homology. (514 aa)
glcEGlycolate oxidase subunit GlcE; Derived by automated computational analysis using gene prediction method: Protein Homology. (363 aa)
A6P55_07245Rieske (2Fe-2S) protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
ghrB_1D-glycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (329 aa)
lutCHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
ANC47085.1Glycolate oxidase subunit GlcD; Derived by automated computational analysis using gene prediction method: Protein Homology. (487 aa)
glcE-2Glycolate oxidase subunit GlcE; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)
glcFGlycolate oxidase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)
gph_1Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. (238 aa)
ghrA_2Glyoxylate/hydroxypyruvate reductase A; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)
ghrB_3Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (302 aa)
ANC45279.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
lutB_14Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (481 aa)
lutA_2Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
glcAL-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. (565 aa)
ghrB_4Bifunctional glyoxylate/hydroxypyruvate reductase B; Catalyzes the formation of glycolate from glyoxylate and glycerate from hydroxypyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (326 aa)
ANC45755.1Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (478 aa)
mdlBAlpha-hydroxy-acid oxidizing enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
ANC45851.1Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)
lutA_3Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
lutB_2(Fe-S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (469 aa)
aceAIsocitrate lyase; Catalyzes the reversible formation of glyoxylate and succinate from isocitrate; glyoxylate bypass pathway; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
aceBMalate synthase A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the malate synthase family. (531 aa)
ANC46506.1phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
Your Current Organism:
Pandoraea pnomenusa
NCBI taxonomy Id: 93220
Other names: ATCC BAA-63, ATCC:BAA:63, CCM 4978, CCUG 38742, CIP 106626, DSM 16536, LMG 18087, LMG:18087, NCTC 13160, P. pnomenusa, Pandoraea pnomenusa Coenye et al. 2000, Pandoraea sp. RB-44
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