(5 nodes) Mixed, incl. Outer membrane protein beta-barrel family, and FecCD transport family network (Pandoraea pnomenusa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	hgpA	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (775 aa)
	hemS	Heme ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)
	hmuT	Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
	feuC	Heme ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (371 aa)
	hmuV	Hemin importer ATP-binding subunit; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. (281 aa)

Your Current Organism:

Pandoraea pnomenusa

NCBI taxonomy Id: 93220
Other names: ATCC BAA-63, ATCC:BAA:63, CCM 4978, CCUG 38742, CIP 106626, DSM 16536, LMG 18087, LMG:18087, NCTC 13160, P. pnomenusa, Pandoraea pnomenusa Coenye et al. 2000, Pandoraea sp. RB-44

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
feuC	hemS	A6P55_11295	A6P55_11285	Heme ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Heme ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.879
feuC	hgpA	A6P55_11295	A6P55_11280	Heme ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
feuC	hmuT	A6P55_11295	A6P55_11290	Heme ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
feuC	hmuV	A6P55_11295	A6P55_11300	Heme ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Hemin importer ATP-binding subunit; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.	0.999
hemS	feuC	A6P55_11285	A6P55_11295	Heme ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heme ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.879
hemS	hgpA	A6P55_11285	A6P55_11280	Heme ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.832
hemS	hmuT	A6P55_11285	A6P55_11290	Heme ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
hemS	hmuV	A6P55_11285	A6P55_11300	Heme ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hemin importer ATP-binding subunit; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.	0.946
hgpA	feuC	A6P55_11280	A6P55_11295	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heme ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.664
hgpA	hemS	A6P55_11280	A6P55_11285	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heme ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.832
hgpA	hmuT	A6P55_11280	A6P55_11290	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.822
hgpA	hmuV	A6P55_11280	A6P55_11300	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hemin importer ATP-binding subunit; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.	0.706
hmuT	feuC	A6P55_11290	A6P55_11295	Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heme ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.999
hmuT	hemS	A6P55_11290	A6P55_11285	Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heme ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
hmuT	hgpA	A6P55_11290	A6P55_11280	Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.822
hmuT	hmuV	A6P55_11290	A6P55_11300	Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hemin importer ATP-binding subunit; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.	0.998
hmuV	feuC	A6P55_11300	A6P55_11295	Hemin importer ATP-binding subunit; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.	Heme ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.999
hmuV	hemS	A6P55_11300	A6P55_11285	Hemin importer ATP-binding subunit; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.	Heme ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.946
hmuV	hgpA	A6P55_11300	A6P55_11280	Hemin importer ATP-binding subunit; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.706
hmuV	hmuT	A6P55_11300	A6P55_11290	Hemin importer ATP-binding subunit; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.	Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998

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