STRINGSTRING
ANC43479.1 ANC43479.1 hutG hutG ANC43940.1 ANC43940.1 pyrC_1 pyrC_1 ves ves ANC45079.1 ANC45079.1 ANC45352.1 ANC45352.1 murR murR iaaA iaaA ANC45873.1 ANC45873.1 dppA_4 dppA_4 ansA_1 ansA_1 yvoA_1 yvoA_1 yvoA_2 yvoA_2 hutU hutU hutH hutH proY proY hutI hutI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ANC43479.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the aspartate/glutamate racemases family. (242 aa)
hutGFormimidoylglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. (315 aa)
ANC43940.1Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)
pyrC_1Peptidase M38; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)
vesAraC family transcriptional regulator; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)
ANC45079.1N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
ANC45352.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate/glutamate racemases family. (246 aa)
murRTranscriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
iaaABeta-aspartyl-peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)
ANC45873.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
dppA_4Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
ansA_1L-asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the asparaginase 1 family. (346 aa)
yvoA_1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
yvoA_2Histidine utilization repressor; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (559 aa)
hutHCatalyzes the degradation of histidine to urocanate and ammmonia; Derived by automated computational analysis using gene prediction method: Protein Homology. (510 aa)
proYProline-specific permease ProY; Cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; Derived by automated computational analysis using gene prediction method: Protein Homology. (459 aa)
hutIImidazolonepropionase; Catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa)
Your Current Organism:
Pandoraea pnomenusa
NCBI taxonomy Id: 93220
Other names: ATCC BAA-63, ATCC:BAA:63, CCM 4978, CCUG 38742, CIP 106626, DSM 16536, LMG 18087, LMG:18087, NCTC 13160, P. pnomenusa, Pandoraea pnomenusa Coenye et al. 2000, Pandoraea sp. RB-44
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