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ANC45384.1 ANC45384.1 ANC45037.1 ANC45037.1 ANC47244.1 ANC47244.1 aidB aidB hemN_2 hemN_2 ANC44480.1 ANC44480.1 ifcA_2 ifcA_2 ANC44374.1 ANC44374.1 ANC44373.1 ANC44373.1 dapB dapB dus_1 dus_1 ANC44112.1 ANC44112.1 ANC43998.1 ANC43998.1 hemF hemF aliB aliB ANC43738.1 ANC43738.1 ANC43638.1 ANC43638.1 ANC43631.1 ANC43631.1 fabV fabV ANC43426.1 ANC43426.1 ifcA_1 ifcA_1 hemN_1 hemN_1 ANC46853.1 ANC46853.1 curA curA ANC47502.1 ANC47502.1 ANC46645.1 ANC46645.1 ANC46613.1 ANC46613.1 ANC46590.1 ANC46590.1 ANC46341.1 ANC46341.1 dus_2 dus_2 pyrD pyrD sdhB sdhB sdhA sdhA sdhD sdhD sdhC sdhC bbsG bbsG pyrDB pyrDB ANC45942.1 ANC45942.1 ANC45863.1 ANC45863.1 ifcA_3 ifcA_3 hsaA hsaA ANC45717.1 ANC45717.1 tyrC tyrC ANC45567.1 ANC45567.1 ANC45408.1 ANC45408.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ANC45384.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (595 aa)
ANC45037.1isovaleryl-CoA dehydrogenase; Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
ANC47244.1Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)
aidBGMC family oxidoreductase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (561 aa)
hemN_2Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (455 aa)
ANC44480.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (132 aa)
ifcA_2Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (530 aa)
ANC44374.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (392 aa)
ANC44373.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (395 aa)
dapB4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (265 aa)
dus_1tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily. (326 aa)
ANC44112.1Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
ANC43998.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (326 aa)
hemFCoproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. (311 aa)
aliBcyclohexanecarboxyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
ANC43738.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
ANC43638.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)
ANC43631.1BEC protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)
fabVtrans-2-enoyl-CoA reductase; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family. (397 aa)
ANC43426.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
ifcA_1Carboxyvinyl-carboxyphosphonate phosphorylmutase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (477 aa)
hemN_1YggW family oxidoreductase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (406 aa)
ANC46853.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (832 aa)
curANADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)
ANC47502.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
ANC46645.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (157 aa)
ANC46613.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)
ANC46590.1NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
ANC46341.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
dus_2tRNA dihydrouridine synthase DusA; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. (337 aa)
pyrDDihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (342 aa)
sdhBPart of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa)
sdhAFumarate reductase (quinol) flavoprotein subunit; Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD- [...] (591 aa)
sdhDSuccinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
sdhCSuccinate dehydrogenase, cytochrome b556 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (137 aa)
bbsGacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
pyrDBDihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate. (316 aa)
ANC45942.14-hydroxyphenylacetate 3-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (493 aa)
ANC45863.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)
ifcA_3Catalyzes the oxidation of tricarballylate to cis-aconitate; FAD-dependent; required for the utilization of tricarballylate as a carbon and energy source by S. enterica; Derived by automated computational analysis using gene prediction method: Protein Homology. (469 aa)
hsaAMonooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa)
ANC45717.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (593 aa)
tyrCPrephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
ANC45567.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (582 aa)
ANC45408.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)
Your Current Organism:
Pandoraea pnomenusa
NCBI taxonomy Id: 93220
Other names: ATCC BAA-63, ATCC:BAA:63, CCM 4978, CCUG 38742, CIP 106626, DSM 16536, LMG 18087, LMG:18087, NCTC 13160, P. pnomenusa, Pandoraea pnomenusa Coenye et al. 2000, Pandoraea sp. RB-44
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