STRINGSTRING
ANC46588.1 ANC46588.1 cysI cysI sir sir yjbI yjbI hmp_1 hmp_1 cyoB_1 cyoB_1 kynA kynA adhB_2 adhB_2 ANC47069.1 ANC47069.1 ypjD ypjD srpA srpA apaG apaG petC petC yedZ yedZ ANC44438.1 ANC44438.1 ccsB ccsB cycA cycA qoxB qoxB soxX soxX ANC47170.1 ANC47170.1 ANC44565.1 ANC44565.1 ANC44566.1 ANC44566.1 fccA fccA ANC44589.1 ANC44589.1 ANC44601.1 ANC44601.1 katA_1 katA_1 ctaC_2 ctaC_2 ctaDII ctaDII ANC45445.1 ANC45445.1 katA_2 katA_2 cyoB_2 cyoB_2 dps_2 dps_2 ANC45641.1 ANC45641.1 nirM nirM cyoB_3 cyoB_3 ANC47401.1 ANC47401.1 cc4 cc4 ANC47411.1 ANC47411.1 sdhD sdhD ctb ctb ANC46472.1 ANC46472.1 yfeX yfeX ANC47484.1 ANC47484.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ANC46588.1Catalase HPII; Derived by automated computational analysis using gene prediction method: Protein Homology. (809 aa)
cysISulfite reductase; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (572 aa)
sirNitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (668 aa)
yjbICyanoglobin; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)
hmp_1Flavohemoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the globin family. (400 aa)
cyoB_1Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (659 aa)
kynATryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. (318 aa)
adhB_2Cytochrome C oxidase Cbb3; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)
ANC47069.1Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
ypjDABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
srpACatalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family. (362 aa)
apaGTransglycosylase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
petCDerived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
yedZSulfoxide reductase heme-binding subunit YedZ; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalyti [...] (207 aa)
ANC44438.1C-type cytochrome biogenesis protein CcsB; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
ccsBCytochrome C biogenesis protein ResB; Derived by automated computational analysis using gene prediction method: Protein Homology. (711 aa)
cycADerived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
qoxBCytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (610 aa)
soxXSulfur oxidation c-type cytochrome SoxX; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
ANC47170.1Sulfur oxidation c-type cytochrome SoxA; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
ANC44565.1Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)
ANC44566.1Derived by automated computational analysis using gene prediction method: Protein Homology. (410 aa)
fccAHypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (116 aa)
ANC44589.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa)
ANC44601.1Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
katA_1Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the catalase family. (489 aa)
ctaC_2Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (410 aa)
ctaDIICytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (530 aa)
ANC45445.1Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)
katA_2Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the catalase family. (482 aa)
cyoB_2Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (663 aa)
dps_2Bacterioferritin; Derived by automated computational analysis using gene prediction method: Protein Homology. (185 aa)
ANC45641.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (406 aa)
nirMHypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (115 aa)
cyoB_3Cytochrome ubiquinol oxidase subunit II; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (668 aa)
ANC47401.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa)
cc4Derived by automated computational analysis using gene prediction method: Protein Homology. (117 aa)
ANC47411.1Derived by automated computational analysis using gene prediction method: Protein Homology. (136 aa)
sdhDSuccinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
ctbGlobin; Derived by automated computational analysis using gene prediction method: Protein Homology. (169 aa)
ANC46472.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
yfeXPeroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)
ANC47484.1Aspartate carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)
Your Current Organism:
Pandoraea pnomenusa
NCBI taxonomy Id: 93220
Other names: ATCC BAA-63, ATCC:BAA:63, CCM 4978, CCUG 38742, CIP 106626, DSM 16536, LMG 18087, LMG:18087, NCTC 13160, P. pnomenusa, Pandoraea pnomenusa Coenye et al. 2000, Pandoraea sp. RB-44
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