STRINGSTRING
fliQ_1 fliQ_1 ANC43148.1 ANC43148.1 fliS fliS fliI fliI fliJ fliJ fliK fliK fliO fliO fliP fliP fliR_1 fliR_1 flgK flgK flgJ flgJ flgD flgD ANC44634.1 ANC44634.1 flgM flgM ANC44636.1 ANC44636.1 flhF flhF flhA_2 flhA_2 flhC flhC flhD flhD spaL spaL yscN_1 yscN_1 ANC45682.1 ANC45682.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fliQ_1EscS/YscS/HrcS family type III secretion system export apparatus protein; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (89 aa)
ANC43148.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (202 aa)
fliSFlagellar protein FliS; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)
fliIFlagellar protein export ATPase FliI; Derived by automated computational analysis using gene prediction method: Protein Homology. (472 aa)
fliJFlagellar export protein FliJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)
fliKHypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (466 aa)
fliOHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (123 aa)
fliPFlagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (234 aa)
fliR_1Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (263 aa)
flgKHypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the flagella basal body rod proteins family. (655 aa)
flgJFlagellar biosynthesis protein FlgJ; Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
flgDFlagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein. (242 aa)
ANC44634.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (345 aa)
flgMHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)
ANC44636.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (152 aa)
flhFFlagellar biosynthesis protein FlhF; Positive regulator of class III flagellar genes; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)
flhA_2Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (701 aa)
flhCTranscriptional regulator FlhC; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family. (198 aa)
flhDFlagellar transcriptional activator FlhD; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family. (105 aa)
spaLEscN/YscN/HrcN family type III secretion system ATPase; Invasion protein InvC; necessary for efficient entry of S.typhimurium into cultured epithelial cells; probable catalytic subunit of a protein translocase; Derived by automated computational analysis using gene prediction method: Protein Homology. (447 aa)
yscN_1EscN/YscN/HrcN family type III secretion system ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)
ANC45682.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (121 aa)
Your Current Organism:
Pandoraea pnomenusa
NCBI taxonomy Id: 93220
Other names: ATCC BAA-63, ATCC:BAA:63, CCM 4978, CCUG 38742, CIP 106626, DSM 16536, LMG 18087, LMG:18087, NCTC 13160, P. pnomenusa, Pandoraea pnomenusa Coenye et al. 2000, Pandoraea sp. RB-44
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