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fcuA_2 fcuA_2 tar_2 tar_2 yqfA yqfA fcuA_1 fcuA_1 tar_1 tar_1 fptA fptA mcp4_2 mcp4_2 bdlA_3 bdlA_3 ycgF ycgF pyp pyp ANC45463.1 ANC45463.1 ANC47286.1 ANC47286.1 bfrD_2 bfrD_2 cheB_2 cheB_2 mcp4_1 mcp4_1 trg_2 trg_2 trg_1 trg_1 tsr_5 tsr_5 tsr_4 tsr_4 ANC44582.1 ANC44582.1 bfrD_1 bfrD_1 fecA fecA bdlA_1 bdlA_1 ANC47120.1 ANC47120.1 aer aer ANC43090.1 ANC43090.1 tsr_2 tsr_2 ANC43039.1 ANC43039.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fcuA_2Ligand-gated channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (716 aa)
tar_2Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (547 aa)
yqfAHemolysin III; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
fcuA_1Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology. (723 aa)
tar_1Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (557 aa)
fptAHypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (720 aa)
mcp4_2Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)
bdlA_3Chemotaxis protein CheA; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)
ycgFDiguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
pypPhosphonate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)
ANC45463.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (240 aa)
ANC47286.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (683 aa)
bfrD_2TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (747 aa)
cheB_2Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (335 aa)
mcp4_1Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (549 aa)
trg_2Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (628 aa)
trg_1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (795 aa)
tsr_5Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (594 aa)
tsr_4Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (541 aa)
ANC44582.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (168 aa)
bfrD_1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (777 aa)
fecAIron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (724 aa)
bdlA_1Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (565 aa)
ANC47120.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
aerChemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (536 aa)
ANC43090.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (131 aa)
tsr_2Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (540 aa)
ANC43039.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (308 aa)
Your Current Organism:
Pandoraea pnomenusa
NCBI taxonomy Id: 93220
Other names: ATCC BAA-63, ATCC:BAA:63, CCM 4978, CCUG 38742, CIP 106626, DSM 16536, LMG 18087, LMG:18087, NCTC 13160, P. pnomenusa, Pandoraea pnomenusa Coenye et al. 2000, Pandoraea sp. RB-44
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