(16 nodes) Acyl-CoA dehydrogenase/oxidase, N-terminal network (Pandoraea pnomenusa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANC43738.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
	aliB	cyclohexanecarboxyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
	ANC44373.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (395 aa)
	ANC44374.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (392 aa)
	ANC46853.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (832 aa)
	ANC46613.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)
	ANC46341.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
	bbsG	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
	ANC45863.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)
	ANC45567.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (582 aa)
	ANC45384.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (595 aa)
	ANC45717.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (593 aa)
	ANC45037.1	isovaleryl-CoA dehydrogenase; Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
	ANC43426.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
	ANC43631.1	BEC protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)
	ANC43638.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)

Your Current Organism:

Pandoraea pnomenusa

NCBI taxonomy Id: 93220
Other names: ATCC BAA-63, ATCC:BAA:63, CCM 4978, CCUG 38742, CIP 106626, DSM 16536, LMG 18087, LMG:18087, NCTC 13160, P. pnomenusa, Pandoraea pnomenusa Coenye et al. 2000, Pandoraea sp. RB-44

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANC43426.1	ANC43638.1	A6P55_03300	A6P55_04640	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
ANC43426.1	ANC44374.1	A6P55_03300	A6P55_09340	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.751
ANC43426.1	ANC45037.1	A6P55_03300	A6P55_13480	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	isovaleryl-CoA dehydrogenase; Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
ANC43426.1	ANC46853.1	A6P55_03300	A6P55_24525	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
ANC43426.1	bbsG	A6P55_03300	A6P55_20250	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.915
ANC43631.1	ANC43638.1	A6P55_04595	A6P55_04640	BEC protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.466
ANC43631.1	aliB	A6P55_04595	A6P55_05310	BEC protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	cyclohexanecarboxyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.694
ANC43638.1	ANC43426.1	A6P55_04640	A6P55_03300	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
ANC43638.1	ANC43631.1	A6P55_04640	A6P55_04595	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	BEC protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.466
ANC43638.1	ANC44373.1	A6P55_04640	A6P55_09335	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.411
ANC43638.1	ANC45863.1	A6P55_04640	A6P55_18485	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.585
ANC43638.1	ANC46853.1	A6P55_04640	A6P55_24525	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
ANC43638.1	aliB	A6P55_04640	A6P55_05310	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	cyclohexanecarboxyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.405
ANC43638.1	bbsG	A6P55_04640	A6P55_20250	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
ANC43738.1	ANC44374.1	A6P55_05300	A6P55_09340	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.789
ANC43738.1	aliB	A6P55_05300	A6P55_05310	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	cyclohexanecarboxyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.556
ANC44373.1	ANC43638.1	A6P55_09335	A6P55_04640	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.411
ANC44373.1	ANC44374.1	A6P55_09335	A6P55_09340	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.790
ANC44374.1	ANC43426.1	A6P55_09340	A6P55_03300	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
ANC44374.1	ANC43738.1	A6P55_09340	A6P55_05300	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.789

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