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lhgO lhgO ANC46624.1 ANC46624.1 ifcA_3 ifcA_3 puuB_1 puuB_1 thiO_4 thiO_4 nadB nadB trxB_2 trxB_2 ifcA_2 ifcA_2 sdhA sdhA trxB_1 trxB_1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lhgOFAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa)
ANC46624.1NAD/FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa)
ifcA_3Catalyzes the oxidation of tricarballylate to cis-aconitate; FAD-dependent; required for the utilization of tricarballylate as a carbon and energy source by S. enterica; Derived by automated computational analysis using gene prediction method: Protein Homology. (469 aa)
puuB_1FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)
thiO_4FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
nadBL-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (534 aa)
trxB_2Thioredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)
ifcA_2Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (530 aa)
sdhAFumarate reductase (quinol) flavoprotein subunit; Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD- [...] (591 aa)
trxB_1FAD/NAD(P)-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (477 aa)
Your Current Organism:
Pandoraea pnomenusa
NCBI taxonomy Id: 93220
Other names: ATCC BAA-63, ATCC:BAA:63, CCM 4978, CCUG 38742, CIP 106626, DSM 16536, LMG 18087, LMG:18087, NCTC 13160, P. pnomenusa, Pandoraea pnomenusa Coenye et al. 2000, Pandoraea sp. RB-44
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