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ppsC ppsC fadI fadI ANC46853.1 ANC46853.1 fadJ fadJ caiD_1 caiD_1 camA camA fcbA2 fcbA2 ANC46674.1 ANC46674.1 ANC46653.1 ANC46653.1 echA8_2 echA8_2 ANC46483.1 ANC46483.1 ANC46357.1 ANC46357.1 bbsG bbsG ybjJ ybjJ ANC45863.1 ANC45863.1 fucP fucP tfdF tfdF puuC puuC echA8_11 echA8_11 fadD_7 fadD_7 ANC45566.1 ANC45566.1 paaJ_2 paaJ_2 ANC47303.1 ANC47303.1 pcaF_2 pcaF_2 thlA_3 thlA_3 echA8_8 echA8_8 thlA_2 thlA_2 calB calB aidB aidB bktB_2 bktB_2 ANC44374.1 ANC44374.1 paaJ_1 paaJ_1 fadD_5 fadD_5 adhB_3 adhB_3 pcaF_1 pcaF_1 echA8_4 echA8_4 rubA_3 rubA_3 rubA_2 rubA_2 flhA_1 flhA_1 hbaA hbaA qorA_2 qorA_2 ANC43768.1 ANC43768.1 mas mas ANC43646.1 ANC43646.1 ANC43638.1 ANC43638.1 fadD_3 fadD_3 betB_2 betB_2 ANC43426.1 ANC43426.1 ANC43216.1 ANC43216.1 rubA_1 rubA_1 thlA_1 thlA_1 bktB_1 bktB_1 qorA_1 qorA_1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ppsCNAD(P)H-quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
fadIacetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (440 aa)
ANC46853.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (832 aa)
fadJ3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (698 aa)
caiD_1enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (269 aa)
camAPyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa)
fcbA2feruloyl-CoA synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (623 aa)
ANC46674.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (263 aa)
ANC46653.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
echA8_2enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
ANC46483.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (477 aa)
ANC46357.1NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. (338 aa)
bbsGacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
ybjJHypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (415 aa)
ANC45863.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)
fucPHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)
tfdFMFS transporter; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)
puuCAldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (491 aa)
echA8_11enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (262 aa)
fadD_7Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (537 aa)
ANC45566.1feruloyl-CoA synthase; Catalyzes the conversion of ferulic acid to feruloyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (624 aa)
paaJ_2acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (399 aa)
ANC47303.13-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (794 aa)
pcaF_2Catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
thlA_3Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
echA8_8enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (273 aa)
thlA_2acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
calBAldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (454 aa)
aidBGMC family oxidoreductase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (561 aa)
bktB_2acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
ANC44374.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (392 aa)
paaJ_1acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (388 aa)
fadD_5AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (514 aa)
adhB_3L-threonine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
pcaF_1Catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
echA8_4enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa)
rubA_3Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the rubredoxin family. (56 aa)
rubA_2Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (56 aa)
flhA_1S-(hydroxymethyl)glutathione dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (368 aa)
hbaALong-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (527 aa)
qorA_2Quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
ANC43768.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (388 aa)
masHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
ANC43646.1acyl-CoA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (85 aa)
ANC43638.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)
fadD_3tRNA-Arg; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (550 aa)
betB_2Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (504 aa)
ANC43426.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
ANC43216.1Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (657 aa)
rubA_1Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the rubredoxin family. (64 aa)
thlA_1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
bktB_1acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
qorA_1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
Your Current Organism:
Pandoraea pnomenusa
NCBI taxonomy Id: 93220
Other names: ATCC BAA-63, ATCC:BAA:63, CCM 4978, CCUG 38742, CIP 106626, DSM 16536, LMG 18087, LMG:18087, NCTC 13160, P. pnomenusa, Pandoraea pnomenusa Coenye et al. 2000, Pandoraea sp. RB-44
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