STRINGSTRING
ANC46581.1 ANC46581.1 ANC46580.1 ANC46580.1 ANC45913.1 ANC45913.1 murR murR glk glk ANC45600.1 ANC45600.1 ybbH_2 ybbH_2 rpiR rpiR bglX bglX ANC44796.1 ANC44796.1 ANC47190.1 ANC47190.1 bcsA bcsA ANC46586.1 ANC46586.1 ANC46585.1 ANC46585.1 ANC46584.1 ANC46584.1 pgi pgi otsA otsA otsB otsB bcsZ bcsZ A6P55_22830 A6P55_22830 ANC46582.1 ANC46582.1 ANC46882.1 ANC46882.1 ANC43201.1 ANC43201.1 ybbH_1 ybbH_1 ANC43272.1 ANC43272.1 gtaB gtaB treF treF grpE grpE algC algC ANC44558.1 ANC44558.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ANC46581.1Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1130 aa)
ANC46580.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1107 aa)
ANC45913.1Glucoamylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (622 aa)
murRTranscriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
glkRpiR family transcriptional regulator; Glucokinase catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology. (620 aa)
ANC45600.1Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
ybbH_2Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
rpiRTranscriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
bglXBeta-glucosidase; Catalyzes the hydrolysis of terminal beta-D-glucosyl residues; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family. (775 aa)
ANC44796.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)
ANC47190.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (179 aa)
bcsACellulose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (885 aa)
ANC46586.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (707 aa)
ANC46585.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (155 aa)
ANC46584.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (741 aa)
pgiHypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPI family. (552 aa)
otsAAlpha,alpha-trehalose-phosphate synthase; Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family. (472 aa)
otsBHypothetical protein; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (242 aa)
bcsZendo-1,4-D-glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 8 (cellulase D) family. (415 aa)
A6P55_22830Glycogen debranching enzyme; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (594 aa)
ANC46582.11,4-alpha-glucan branching enzyme; Catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; Derived by automated computational analysis using gene prediction method: Protein Homology. (743 aa)
ANC46882.1RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
ANC43201.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
ybbH_1RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
ANC43272.1RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
gtaBUTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
treFAlpha,alpha-trehalase; Cytoplasmic; catalyzes the hydrolysis of trehalose to glucose; Derived by automated computational analysis using gene prediction method: Protein Homology. (544 aa)
grpENucleotide exchange factor GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds [...] (181 aa)
algCPhosphoglucomutase; Catalyzes the interconversion of alpha-D-mannose 1-phosphate to alpha-D-mannose 6-phosphate and alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology. (465 aa)
ANC44558.1Glucose-1-phosphate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
Your Current Organism:
Pandoraea pnomenusa
NCBI taxonomy Id: 93220
Other names: ATCC BAA-63, ATCC:BAA:63, CCM 4978, CCUG 38742, CIP 106626, DSM 16536, LMG 18087, LMG:18087, NCTC 13160, P. pnomenusa, Pandoraea pnomenusa Coenye et al. 2000, Pandoraea sp. RB-44
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